0
Call US: +91 8005490449
E-mail : bhaskar.shukla@cimap.res.in
Time
| |
Lippia alba

Commonly known as Bushy lippia. It is native to southern and central America. The plant is medicinally useful and the leaves are also utilized for flavoring.

Total Number of Sequences : 325

NOTE: Status of sequences among the 325 available data in MAPsDb

Coding Sequence Gene ontology Statistics

  • cRNA :17

  • lncRNA:131

  • miRNA: 2

  • Other ncRNA : 175

  • Gene :0

  • SRA Data: 2

Coding Information
Acc No. Species Name Description Length GO IDs GO Names Enzyme Names InterPro GO Names Peptide Information BLAST Nucleotide Sequence
LS453190.1 Lippia alba rve domain-containing protein/RVT_3 domain-containing protein 165 P:GO:0006278; P:GO:0006310; P:GO:0006508; P:GO:0015074; P:GO:0090502; F:GO:0003723; F:GO:0003887; F:GO:0003964; F:GO:0004176; F:GO:0004222; F:GO:0004497; F:GO:0004523; F:GO:0005506; F:GO:0005524; F:GO:0008270; F:GO:0016705; F:GO:0016887; F:GO:0020037; C:GO:0005634; C:GO:0009507; C:GO:0009526; C:GO:0016021; C:GO:0030430 P:RNA-dependent DNA biosynthetic process; P:DNA recombination; P:proteolysis; P:DNA integration; P:RNA phosphodiester bond hydrolysis, endonucleolytic; F:RNA binding; F:DNA-directed DNA polymerase activity; F:RNA-directed DNA polymerase activity; F:ATP-dependent peptidase activity; F:metalloendopeptidase activity; F:monooxygenase activity; F:RNA-DNA hybrid ribonuclease activity; F:iron ion binding; F:ATP binding; F:zinc ion binding; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; F:ATP hydrolysis activity; F:heme binding; C:nucleus; C:chloroplast; C:plastid envelope; C:integral component of membrane; C:host cell cytoplasm Acting on ester bonds; Acting on peptide bonds (peptidases); Acting on acid anhydrides; Acting on paired donors, with incorporation or reduction of molecular oxygen. The oxygen incorporated need not be derived from O(2); RNA-directed DNA polymerase; DNA-directed DNA polymerase; Ribonuclease H no IPS match view details
MW261998.1 Lippia alba ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit 524 P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast Ribulose-bisphosphate carboxylase; Oxidoreductases P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity view details
MH092658.1 Lippia alba ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit 539 P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast Ribulose-bisphosphate carboxylase; Oxidoreductases P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity view details
MW557316.1 Lippia alba maturase K 792 P:GO:0006397; P:GO:0008033; P:GO:0008380; F:GO:0003723; C:GO:0005739; C:GO:0009507 P:mRNA processing; P:tRNA processing; P:RNA splicing; F:RNA binding; C:mitochondrion; C:chloroplast P:mRNA processing; C:chloroplast view details
GQ279096.1 Lippia alba limonene-myrcene synthase 445 P:GO:0016102; P:GO:0045339; F:GO:0000287; F:GO:0010334; F:GO:0034002 P:diterpenoid biosynthetic process; P:farnesyl diphosphate catabolic process; F:magnesium ion binding; F:sesquiterpene synthase activity; F:(R)-limonene synthase activity (R)-limonene synthase F:magnesium ion binding; F:terpene synthase activity; F:lyase activity view details
GQ279097.1 Lippia alba terpene synthase 10-like 445 P:GO:0016102; P:GO:0045339; F:GO:0000287; F:GO:0010334 P:diterpenoid biosynthetic process; P:farnesyl diphosphate catabolic process; F:magnesium ion binding; F:sesquiterpene synthase activity Carbon-oxygen lyases F:magnesium ion binding; F:terpene synthase activity; F:lyase activity view details
GQ279098.1 Lippia alba limonene-myrcene synthase 418 P:GO:0016102; F:GO:0000287; F:GO:0010333 P:diterpenoid biosynthetic process; F:magnesium ion binding; F:terpene synthase activity Carbon-oxygen lyases F:magnesium ion binding; F:terpene synthase activity; F:lyase activity view details
JX966768.1 Lippia alba pentatricopeptide repeat-containing protein 123 1257 no IPS match view details
MW397427.1 Lippia alba pentatricopeptide repeat-containing protein 97 738 F:protein binding view details
JX966718.1 Lippia alba pentatricopeptide repeat-containing protein 81 1074 no IPS match view details
MW397351.1 Lippia alba pentatricopeptide repeat-containing protein 90 1021 no IPS match view details
JX966672.1 Lippia alba pentatricopeptide repeat-containing protein 11 1241 no IPS match view details
MW397428.1 Lippia alba pentatricopeptide repeat-containing protein 97 738 F:protein binding view details
MW397288.1 Lippia alba pentatricopeptide repeat-containing protein 81 1206 no IPS match view details
MW397241.1 Lippia alba pentatricopeptide repeat-containing protein 123 1259 no IPS match view details
MW397492.1 Lippia alba pentatricopeptide repeat-containing protein 11 1231 F:protein binding view details
MW296986.1 Lippia alba Hypothetical predicted protein 494 no IPS match view details
lncRNA Information
Acc No. Species Name GC % Length coding potential calculator Status Structure BLAST Sequence
EU761144.1 Lippia alba 39.74% 302 CPC2 : 0.0100451
LGC :
PLEK : -2.383040 		Non-Coding
MN746496.1 Lippia alba 39.28% 359 CPC2 : 0.0091724
LGC : 0.000e+00
PLEK : -2.358310 		Non-Coding
MN746490.1 Lippia alba 39.78% 357 CPC2 : 0.00854615
LGC : 0.000e+00
PLEK : -2.460580 		Non-Coding
MN746484.1 Lippia alba 39.5% 357 CPC2 : 0.0091724
LGC : 0.000e+00
PLEK : -2.437150 		Non-Coding
KF611780.2 Lippia alba 29.45% 703 CPC2 : 0.0270287
LGC : 0.15
PLEK : -2.603340 		Non-Coding
JN626262.1 Lippia alba 31.46% 642 CPC2 : 0.00348099
LGC : 0.000e+00
PLEK : -1.865880 		Non-Coding
MN746447.1 Lippia alba 39.5% 357 CPC2 : 0.0091724
LGC : 0.000e+00
PLEK : -2.437150 		Non-Coding
AY945814.1 Lippia alba 60.21% 284 CPC2 : 0.158196
LGC : 0.000e+00
PLEK : -2.253520 		Non-Coding
EU761085.1 Lippia alba 40% 515 CPC2 : 0.202841
LGC : -0.707
PLEK : -1.817720 		Non-Coding
MN746474.1 Lippia alba 39.61% 356 CPC2 : 0.00844979
LGC : 0.000e+00
PLEK : -2.438100 		Non-Coding
MN746471.1 Lippia alba 39.4% 368 CPC2 : 0.00733376
LGC : 0.000e+00
PLEK : -2.314340 		Non-Coding
EU761083.1 Lippia alba 39.76% 503 CPC2 : 0.138863
LGC : -0.707
PLEK : -1.842150 		Non-Coding
EU761150.1 Lippia alba 40.19% 316 CPC2 : 0.0109937
LGC : 0.000e+00
PLEK : -2.423710 		Non-Coding
EU761141.1 Lippia alba 40.06% 322 CPC2 : 0.00839702
LGC : 0.000e+00
PLEK : -2.269270 		Non-Coding
MN746446.1 Lippia alba 39.61% 356 CPC2 : 0.0094406
LGC : 0.000e+00
PLEK : -2.490800 		Non-Coding
MN746449.1 Lippia alba 39.61% 356 CPC2 : 0.00844979
LGC : 0.000e+00
PLEK : -2.438100 		Non-Coding
JN626260.1 Lippia alba 30.59% 680 CPC2 : 0.0075059
LGC : 0.000e+00
PLEK : -2.791600 		Non-Coding
EU761134.1 Lippia alba 39.72% 287 CPC2 : 0.00980698
LGC : 0.000e+00
PLEK : -2.393940 		Non-Coding
MN746483.1 Lippia alba 39.89% 366 CPC2 : 0.00695589
LGC : 0.000e+00
PLEK : -2.369780 		Non-Coding
MN746457.1 Lippia alba 39.73% 370 CPC2 : 0.00783389
LGC : 0.000e+00
PLEK : -2.403810 		Non-Coding
MN746453.1 Lippia alba 39.44% 355 CPC2 : 0.00817313
LGC : 0.000e+00
PLEK : -2.452400 		Non-Coding
MN746493.1 Lippia alba 39.94% 358 CPC2 : 0.00827752
LGC : 0.000e+00
PLEK : -2.464540 		Non-Coding
MN746450.1 Lippia alba 39.44% 355 CPC2 : 0.00817313
LGC : 0.000e+00
PLEK : -2.452400 		Non-Coding
MN746495.1 Lippia alba 39.73% 370 CPC2 : 0.00844979
LGC : 0.000e+00
PLEK : -2.342860 		Non-Coding
EU761130.1 Lippia alba 39.37% 287 CPC2 : 0.0102836
LGC : 0.000e+00
PLEK : -2.356240 		Non-Coding
KF611775.2 Lippia alba 44.23% 685 CPC2 : 0.013486
LGC : -0.773
PLEK : -2.717470 		Non-Coding
EU761139.1 Lippia alba 39.94% 308 CPC2 : 0.0990938
LGC : 0.000e+00
PLEK : -2.443960 		Non-Coding
MN746478.1 Lippia alba 37.3% 311 CPC2 : 0.0135753
LGC : 0.000e+00
PLEK : -2.429580 		Non-Coding
EU761145.1 Lippia alba 40.97% 310 CPC2 : 0.0134527
LGC : -0.218
PLEK : -2.402780 		Non-Coding
MN746488.1 Lippia alba 39.21% 329 CPC2 : 0.012272
LGC : 0.000e+00
PLEK : -2.430540 		Non-Coding
EU761082.1 Lippia alba 39.17% 480 CPC2 : 0.132332
LGC : -0.707
PLEK : -1.919620 		Non-Coding
EU761146.1 Lippia alba 41.72% 326 CPC2 : 0.0175746
LGC : -0.218
PLEK : -2.385980 		Non-Coding
EU761096.1 Lippia alba 39.76% 503 CPC2 : 0.138863
LGC : -0.707
PLEK : -1.836200 		Non-Coding
JN626264.1 Lippia alba 41.7% 717 CPC2 : 0.057845
LGC : -0.046
PLEK : -1.695630 		Non-Coding
KF611782.2 Lippia alba 40.66% 664 CPC2 : 0.0149626
LGC : -0.841
PLEK : -1.795020 		Non-Coding
KF611776.2 Lippia alba 37.11% 698 CPC2 : 0.0137638
LGC : -0.152
PLEK : -1.354060 		Non-Coding
EU761142.1 Lippia alba 40.26% 303 CPC2 : 0.0121272
LGC : 0.000e+00
PLEK : -2.410960 		Non-Coding
MN746464.1 Lippia alba 39.5% 357 CPC2 : 0.0094406
LGC : 0.000e+00
PLEK : -2.397660 		Non-Coding
EU761102.1 Lippia alba 39.64% 507 CPC2 : 0.118689
LGC : -0.707
PLEK : -1.824530 		Non-Coding
MN746498.1 Lippia alba 39.29% 336 CPC2 : 0.0238224
LGC : 0.000e+00
PLEK : -2.458350 		Non-Coding
EU761151.1 Lippia alba 40.85% 328 CPC2 : 0.0113342
LGC : 0.000e+00
PLEK : -2.436030 		Non-Coding
EU761133.1 Lippia alba 40.06% 322 CPC2 : 0.00839702
LGC : 0.000e+00
PLEK : -2.269270 		Non-Coding
EU761084.1 Lippia alba 39.88% 504 CPC2 : 0.138863
LGC : -0.707
PLEK : -1.832270 		Non-Coding
EU761148.1 Lippia alba 40.81% 321 CPC2 : 0.0157438
LGC : 0.000e+00
PLEK : -2.454950 		Non-Coding
MN746469.1 Lippia alba 39.72% 355 CPC2 : 0.0094406
LGC : 0.000e+00
PLEK : -2.528120 		Non-Coding
MN746448.1 Lippia alba 39.5% 357 CPC2 : 0.0091724
LGC : 0.000e+00
PLEK : -2.437150 		Non-Coding
EU761081.1 Lippia alba 40% 515 CPC2 : 0.202841
LGC : -0.707
PLEK : -1.817720 		Non-Coding
JN626265.1 Lippia alba 41.7% 717 CPC2 : 0.057845
LGC : -0.046
PLEK : -1.695630 		Non-Coding
MN746491.1 Lippia alba 39.89% 366 CPC2 : 0.00855558
LGC : 0.000e+00
PLEK : -2.430360 		Non-Coding
MN746481.1 Lippia alba 39.5% 357 CPC2 : 0.0091724
LGC : 0.000e+00
PLEK : -2.437150 		Non-Coding
MN746479.1 Lippia alba 39.5% 357 CPC2 : 0.0091724
LGC : 0.000e+00
PLEK : -2.437150 		Non-Coding
MN746485.1 Lippia alba 39.55% 354 CPC2 : 0.00844979
LGC : 0.000e+00
PLEK : -2.432480 		Non-Coding
JQ806353.1 Lippia alba 37.07% 696 CPC2 : 0.0136554
LGC : -0.152
PLEK : -1.362280 		Non-Coding
JN626266.1 Lippia alba 38.52% 688 CPC2 : 0.123175
LGC : -0.102
PLEK : -0.862047 		Non-Coding
EU761077.1 Lippia alba 61.62% 654 CPC2 : 0.0296279
LGC : -1.104
PLEK : -1.840780 		Non-Coding
KF611777.2 Lippia alba 32.61% 690 CPC2 : 0.0152453
LGC : -0.257
PLEK : -2.339460 		Non-Coding
AY945827.1 Lippia alba 38.12% 926 CPC2 : 0.0372716
LGC : -0.181
PLEK : -1.234980 		Non-Coding
MN746472.1 Lippia alba 39.39% 358 CPC2 : 0.00890589
LGC : 0.000e+00
PLEK : -2.401610 		Non-Coding
MN746501.1 Lippia alba 39.72% 355 CPC2 : 0.00757475
LGC : 0.000e+00
PLEK : -2.476440 		Non-Coding
MN744511.1 Lippia alba 62.18% 542 CPC2 : 0.182294
LGC : -0.422
PLEK : -1.887730 		Non-Coding
EU761147.1 Lippia alba 40.81% 321 CPC2 : 0.0499041
LGC : 0.000e+00
PLEK : -2.337430 		Non-Coding
JN626261.1 Lippia alba 32.48% 665 CPC2 : 0.00850506
LGC : 0.000e+00
PLEK : -1.658880 		Non-Coding
JN626263.1 Lippia alba 41.22% 541 CPC2 : 0.0176704
LGC : -0.386
PLEK : -2.256900 		Non-Coding
JQ806354.2 Lippia alba 29.45% 703 CPC2 : 0.0270287
LGC : 0.15
PLEK : -2.603340 		Non-Coding
EU761087.1 Lippia alba 39.72% 496 CPC2 : 0.14975
LGC : -0.707
PLEK : -1.867300 		Non-Coding
EU761099.1 Lippia alba 39.72% 506 CPC2 : 0.178775
LGC : -0.707
PLEK : -1.797960 		Non-Coding
EU761136.1 Lippia alba 42.64% 333 CPC2 : 0.089092
LGC : 0.000e+00
PLEK : -2.166470 		Non-Coding
MN746458.1 Lippia alba 39.78% 357 CPC2 : 0.0094406
LGC : 0.000e+00
PLEK : -2.513220 		Non-Coding
MN746499.1 Lippia alba 39.94% 358 CPC2 : 0.00827752
LGC : 0.000e+00
PLEK : -2.464540 		Non-Coding
EU761135.1 Lippia alba 39.72% 287 CPC2 : 0.00980698
LGC : 0.000e+00
PLEK : -2.393940 		Non-Coding
JX966924.1 Lippia alba 31.27% 1452 CPC2 : 0.17895
LGC : -0.449
PLEK : -1.346410 		Non-Coding
EU761089.1 Lippia alba 38.18% 461 CPC2 : 0.19299
LGC : -0.707
PLEK : -1.972680 		Non-Coding
MN746492.1 Lippia alba 39.78% 357 CPC2 : 0.00854615
LGC : 0.000e+00
PLEK : -2.460580 		Non-Coding
MN746487.1 Lippia alba 39.72% 355 CPC2 : 0.00757475
LGC : 0.000e+00
PLEK : -2.476440 		Non-Coding
EU761103.1 Lippia alba 39.84% 502 CPC2 : 0.14975
LGC : -0.707
PLEK : -1.807410 		Non-Coding
MN746467.1 Lippia alba 37.22% 309 CPC2 : 0.0143385
LGC : 0.000e+00
PLEK : -2.393850 		Non-Coding
MN746465.1 Lippia alba 39.89% 356 CPC2 : 0.0094406
LGC : 0.000e+00
PLEK : -2.513260 		Non-Coding
MN746456.1 Lippia alba 39.89% 356 CPC2 : 0.0094406
LGC : 0.000e+00
PLEK : -2.513260 		Non-Coding
EU761140.1 Lippia alba 39.66% 295 CPC2 : 0.0229129
LGC : -0.218
PLEK : -2.411500 		Non-Coding
MN746470.1 Lippia alba 39.55% 359 CPC2 : 0.0144047
LGC : 0.000e+00
PLEK : -2.362560 		Non-Coding
MN744470.1 Lippia alba 62.67% 651 CPC2 : 0.189328
LGC : -0.824
PLEK : -1.759590 		Non-Coding
EU761097.1 Lippia alba 39.33% 506 CPC2 : 0.118689
LGC : -0.707
PLEK : -1.844540 		Non-Coding
MN746489.1 Lippia alba 39.78% 357 CPC2 : 0.00854615
LGC : 0.000e+00
PLEK : -2.460580 		Non-Coding
EU761093.1 Lippia alba 39.64% 497 CPC2 : 0.14975
LGC : -0.707
PLEK : -1.859200 		Non-Coding
EU761131.1 Lippia alba 37.31% 268 CPC2 : 0.0114571
LGC : 0.000e+00
PLEK : -2.328880 		Non-Coding
MN746476.1 Lippia alba 39.02% 328 CPC2 : 0.0121555
LGC : 0.000e+00
PLEK : -2.416820 		Non-Coding
EU761094.1 Lippia alba 39.64% 497 CPC2 : 0.14975
LGC : -0.707
PLEK : -1.859200 		Non-Coding
MN744608.1 Lippia alba 60.68% 740 CPC2 : 0.167595
LGC : -0.534
PLEK : -1.612890 		Non-Coding
JX966978.1 Lippia alba 26.92% 665 CPC2 : 0.0146201
LGC : 0.177
PLEK : -2.233660 		Non-Coding
EU761101.1 Lippia alba 39.8% 505 CPC2 : 0.154498
LGC : -0.707
PLEK : -1.789560 		Non-Coding
EU761098.1 Lippia alba 38.71% 434 CPC2 : 0.118689
LGC : -0.202
PLEK : -1.875460 		Non-Coding
MN746455.1 Lippia alba 35.66% 286 CPC2 : 1.15852e-05
LGC : 0.000e+00
PLEK : -2.428930 		Non-Coding
MN746459.1 Lippia alba 37.54% 317 CPC2 : 0.0109597
LGC : 0.000e+00
PLEK : -2.382590 		Non-Coding
KF611779.2 Lippia alba 25.97% 720 CPC2 : 0.0135735
LGC : 0.129
PLEK : -2.056900 		Non-Coding
MN746477.1 Lippia alba 39.44% 355 CPC2 : 0.00817313
LGC : 0.000e+00
PLEK : -2.452400 		Non-Coding
MN746468.1 Lippia alba 39.5% 357 CPC2 : 0.0091724
LGC : 0.000e+00
PLEK : -2.437150 		Non-Coding
KF611781.1 Lippia alba 42.54% 684 CPC2 : 0.0119539
LGC : -0.312
PLEK : -1.202580 		Non-Coding
JX966870.1 Lippia alba 32.08% 932 CPC2 : 0.0111295
LGC : 0.000e+00
PLEK : -1.298620 		Non-Coding
EU761138.1 Lippia alba 40.37% 327 CPC2 : 0.0806832
LGC : 0.000e+00
PLEK : -2.316840 		Non-Coding
MN746462.1 Lippia alba 39.78% 362 CPC2 : 0.00918161
LGC : 0.000e+00
PLEK : -2.413770 		Non-Coding
EU761092.1 Lippia alba 39.88% 504 CPC2 : 0.138863
LGC : -0.707
PLEK : -1.832270 		Non-Coding
EU761088.1 Lippia alba 38.18% 461 CPC2 : 0.19299
LGC : -0.707
PLEK : -1.972680 		Non-Coding
MN746452.1 Lippia alba 39.61% 356 CPC2 : 0.00844979
LGC : 0.000e+00
PLEK : -2.438100 		Non-Coding
KF611778.1 Lippia alba 44.51% 692 CPC2 : 0.0119268
LGC : -0.468
PLEK : -1.802490 		Non-Coding
EU761090.1 Lippia alba 39.72% 506 CPC2 : 0.138863
LGC : -0.707
PLEK : -1.803270 		Non-Coding
MN746451.1 Lippia alba 39.27% 354 CPC2 : 0.0091724
LGC : 0.000e+00
PLEK : -2.387980 		Non-Coding
EU761149.1 Lippia alba 39.94% 313 CPC2 : 0.00661505
LGC : 0.000e+00
PLEK : -2.349120 		Non-Coding
EU761091.1 Lippia alba 38.74% 462 CPC2 : 0.190467
LGC : -0.707
PLEK : -1.963170 		Non-Coding
JN626267.1 Lippia alba 44.59% 693 CPC2 : 0.0186955
LGC : -0.499
PLEK : -1.706920 		Non-Coding
MN746454.1 Lippia alba 37.62% 311 CPC2 : 0.0135753
LGC : 0.000e+00
PLEK : -2.477280 		Non-Coding
MN746494.1 Lippia alba 39.78% 357 CPC2 : 0.0094406
LGC : 0.000e+00
PLEK : -2.416460 		Non-Coding
MN746482.1 Lippia alba 39.5% 357 CPC2 : 0.0091724
LGC : 0.000e+00
PLEK : -2.437150 		Non-Coding
EU761137.1 Lippia alba 39.93% 298 CPC2 : 0.0488305
LGC : 0.000e+00
PLEK : -2.363710 		Non-Coding
MN746480.1 Lippia alba 39.22% 357 CPC2 : 0.0091724
LGC : 0.000e+00
PLEK : -2.395700 		Non-Coding
MN746466.1 Lippia alba 39.11% 358 CPC2 : 0.0091724
LGC : 0.000e+00
PLEK : -2.363100 		Non-Coding
EU761100.1 Lippia alba 39.72% 506 CPC2 : 0.138863
LGC : -0.707
PLEK : -1.803270 		Non-Coding
MN746497.1 Lippia alba 39.22% 357 CPC2 : 0.0091724
LGC : 0.000e+00
PLEK : -2.396280 		Non-Coding
MN746475.1 Lippia alba 39.61% 356 CPC2 : 0.00844979
LGC : 0.000e+00
PLEK : -2.438100 		Non-Coding
MN746460.1 Lippia alba 39.15% 355 CPC2 : 0.0091724
LGC : 0.000e+00
PLEK : -2.410330 		Non-Coding
MN746486.1 Lippia alba 39.66% 358 CPC2 : 0.00890589
LGC : 0.000e+00
PLEK : -2.441430 		Non-Coding
EU761132.1 Lippia alba 39.83% 344 CPC2 : 0.00660409
LGC : 0.000e+00
PLEK : -2.363610 		Non-Coding
EU761095.1 Lippia alba 39.64% 497 CPC2 : 0.14975
LGC : -0.707
PLEK : -1.859200 		Non-Coding
EU761143.1 Lippia alba 40.13% 304 CPC2 : 0.0121272
LGC : 0.000e+00
PLEK : -2.421970 		Non-Coding
EU761086.1 Lippia alba 39.64% 497 CPC2 : 0.14975
LGC : -0.707
PLEK : -1.859200 		Non-Coding
MN746473.1 Lippia alba 39.61% 356 CPC2 : 0.00844979
LGC : 0.000e+00
PLEK : -2.438100 		Non-Coding
MN746461.1 Lippia alba 39.61% 356 CPC2 : 0.00844979
LGC : 0.000e+00
PLEK : -2.438100 		Non-Coding
MN746500.1 Lippia alba 39.94% 358 CPC2 : 0.00827752
LGC : 0.000e+00
PLEK : -2.464540 		Non-Coding
MF077350.1 Lippia alba 49.67% 1534 CPC2 : 0.0267153
LGC : -1.163
PLEK : -1.431940 		Non-Coding
EU761078.1 Lippia alba 62.17% 637 CPC2 : 0.0384372
LGC : -1.115
PLEK : -1.759600 		Non-Coding
EU761152.1 Lippia alba 40.84% 311 CPC2 : 0.0205448
LGC : 0.000e+00
PLEK : -2.485060 		Non-Coding
MN746463.1 Lippia alba 39.61% 356 CPC2 : 0.00569265
LGC : 0.000e+00
PLEK : -2.402850 		Non-Coding
Gene Information
0 results
Gene ID Species Name Symbol Aliases Description Start position End position Orientation Genomic Context
miRNA Information
Acc. No. Species Name Sequence length Total pre-miRNA Sequence
LS453184.1 Lippia alba 174 1
Details
JX966817.1 Lippia alba 416 4
Details
RNA-Seq Information
Experiment Acc. Species Name SRA Study SRA Run Treatment Development Stage Tissue Data Accesss
SRX6455808 Lippia alba SRP215013 SRR9697534 young leaf
SRX2977764 Lippia alba SRP110864  SRR5796991
Other non-coding Sequence Information
Acc. No Species Name Length GC content Status Sequence
MN744484.1 Lippia alba 649 62.92% Non-coding
MW292757.1 Lippia alba 665 61.56% Non-coding
MN744479.1 Lippia alba 650 62.67% Non-coding
MN744595.1 Lippia alba 737 60.84% Non-coding
MN744462.1 Lippia alba 665 62.46% Non-coding
MN744637.1 Lippia alba 735 60.46% Non-coding
MN744585.1 Lippia alba 737 60.70% Non-coding
MN744502.1 Lippia alba 656 62.40% Non-coding
MN744632.1 Lippia alba 737 60.70% Non-coding
MN744577.1 Lippia alba 737 60.98% Non-coding
MN744635.1 Lippia alba 736 60.52% Non-coding
MN744574.1 Lippia alba 737 60.16% Non-coding
MN744643.1 Lippia alba 737 60.70% Non-coding
MN744459.1 Lippia alba 659 62.42% Non-coding
MN744648.1 Lippia alba 737 60.84% Non-coding
MN744478.1 Lippia alba 665 62.31% Non-coding
MN744491.1 Lippia alba 659 62.42% Non-coding
MN744639.1 Lippia alba 737 60.70% Non-coding
MN744495.1 Lippia alba 659 62.42% Non-coding
MN744507.1 Lippia alba 650 62.83% Non-coding
MN744578.1 Lippia alba 737 60.98% Non-coding
MN744647.1 Lippia alba 737 60.98% Non-coding
MN744474.1 Lippia alba 658 62.22% Non-coding
MN744481.1 Lippia alba 646 63.21% Non-coding
MN744512.1 Lippia alba 649 62.92% Non-coding
MN744483.1 Lippia alba 659 62.12% Non-coding
LS453193.1 Lippia alba 153 57.79% Non-coding
LS453183.1 Lippia alba 185 24.73% Non-coding
MN744580.1 Lippia alba 737 60.98% Non-coding
MN744477.1 Lippia alba 666 62.22% Non-coding
MN744646.1 Lippia alba 737 60.70% Non-coding
MN744510.1 Lippia alba 662 62.59% Non-coding
MN744627.1 Lippia alba 737 60.98% Non-coding
MN744603.1 Lippia alba 737 60.84% Non-coding
MN744516.1 Lippia alba 655 62.65% Non-coding
MW292758.1 Lippia alba 711 61.38% Non-coding
MN744618.1 Lippia alba 737 60.84% Non-coding
MN744591.1 Lippia alba 737 60.98% Non-coding
MN744649.1 Lippia alba 737 60.70% Non-coding
LS453188.1 Lippia alba 173 40.23% Non-coding
MN744482.1 Lippia alba 650 62.83% Non-coding
MN744584.1 Lippia alba 737 60.70% Non-coding
MN744592.1 Lippia alba 737 60.98% Non-coding
MN744642.1 Lippia alba 737 60.84% Non-coding
MN744469.1 Lippia alba 651 62.73% Non-coding
MN744636.1 Lippia alba 736 60.24% Non-coding
MN744534.1 Lippia alba 666 62.22% Non-coding
MN744602.1 Lippia alba 736 61.06% Non-coding
MN744485.1 Lippia alba 667 62.13% Non-coding
LS453194.1 Lippia alba 172 34.68% Non-coding
MN744587.1 Lippia alba 737 60.70% Non-coding
MN744612.1 Lippia alba 737 60.70% Non-coding
MN744528.1 Lippia alba 658 62.37% Non-coding
MN744531.1 Lippia alba 671 62.20% Non-coding
MN744645.1 Lippia alba 737 60.57% Non-coding
LS453186.1 Lippia alba 149 40.67% Non-coding
MN744623.1 Lippia alba 737 60.98% Non-coding
MN744614.1 Lippia alba 737 60.84% Non-coding
MN744575.1 Lippia alba 737 60.70% Non-coding
MN744520.1 Lippia alba 666 62.22% Non-coding
MN744513.1 Lippia alba 656 62.86% Non-coding
MN744524.1 Lippia alba 668 62.18% Non-coding
MN744535.1 Lippia alba 657 62.31% Non-coding
MN744628.1 Lippia alba 737 60.98% Non-coding
MN744492.1 Lippia alba 658 62.67% Non-coding
MN744508.1 Lippia alba 663 62.65% Non-coding
MN744490.1 Lippia alba 661 61.93% Non-coding
MN744461.1 Lippia alba 660 62.18% Non-coding
MN744476.1 Lippia alba 668 62.03% Non-coding
MN744600.1 Lippia alba 737 60.84% Non-coding
MN744621.1 Lippia alba 737 60.57% Non-coding
MN744494.1 Lippia alba 651 62.58% Non-coding
MN744472.1 Lippia alba 669 62.24% Non-coding
MN744622.1 Lippia alba 736 60.79% Non-coding
MN744465.1 Lippia alba 640 62.87% Non-coding
MN744480.1 Lippia alba 651 63.04% Non-coding
MN744527.1 Lippia alba 665 62.31% Non-coding
MN744471.1 Lippia alba 652 62.63% Non-coding
MN744521.1 Lippia alba 658 62.37% Non-coding
MN744626.1 Lippia alba 737 60.84% Non-coding
MN744529.1 Lippia alba 670 61.70% Non-coding
MN744487.1 Lippia alba 663 62.65% Non-coding
MN744576.1 Lippia alba 737 60.57% Non-coding
MN744515.1 Lippia alba 669 62.39% Non-coding
MN744607.1 Lippia alba 736 60.79% Non-coding
MN744594.1 Lippia alba 737 60.98% Non-coding
LS453185.1 Lippia alba 146 50.34% Non-coding
MN744458.1 Lippia alba 656 62.71% Non-coding
MN744468.1 Lippia alba 657 62.61% Non-coding
MN744573.1 Lippia alba 737 60.57% Non-coding
MN744489.1 Lippia alba 652 62.79% Non-coding
MN744537.1 Lippia alba 657 62.31% Non-coding
MN744640.1 Lippia alba 737 60.84% Non-coding
MN744493.1 Lippia alba 633 63.41% Non-coding
MN744620.1 Lippia alba 737 60.84% Non-coding
MN744630.1 Lippia alba 737 60.98% Non-coding
JQ806352.1 Lippia alba 693 54.61% Non-coding
MN744532.1 Lippia alba 669 62.24% Non-coding
MN744610.1 Lippia alba 737 60.84% Non-coding
MN744503.1 Lippia alba 660 62.33% Non-coding
MN744650.1 Lippia alba 736 61.33% Non-coding
MN744583.1 Lippia alba 737 60.84% Non-coding
MN744466.1 Lippia alba 658 62.67% Non-coding
MN744631.1 Lippia alba 737 60.84% Non-coding
MN744538.1 Lippia alba 661 62.08% Non-coding
MN744599.1 Lippia alba 737 60.84% Non-coding
KF611774.2 Lippia alba 693 54.61% Non-coding
LS453189.1 Lippia alba 159 32.50% Non-coding
MN744598.1 Lippia alba 737 61.11% Non-coding
MN744638.1 Lippia alba 737 60.84% Non-coding
MN744613.1 Lippia alba 736 60.79% Non-coding
LS453195.1 Lippia alba 154 32.90% Non-coding
MN744641.1 Lippia alba 737 60.57% Non-coding
MN744460.1 Lippia alba 652 62.94% Non-coding
MN744518.1 Lippia alba 670 62.44% Non-coding
MN744505.1 Lippia alba 653 62.84% Non-coding
MN744530.1 Lippia alba 655 62.50% Non-coding
MN744522.1 Lippia alba 659 61.97% Non-coding
MN744615.1 Lippia alba 737 60.16% Non-coding
MN744486.1 Lippia alba 648 63.02% Non-coding
MN744526.1 Lippia alba 670 62.15% Non-coding
MN744605.1 Lippia alba 737 60.57% Non-coding
MN744634.1 Lippia alba 737 60.84% Non-coding
MN744475.1 Lippia alba 666 62.37% Non-coding
MN744625.1 Lippia alba 737 60.84% Non-coding
MN744464.1 Lippia alba 659 62.88% Non-coding
LS453191.1 Lippia alba 150 52.98% Non-coding
MN744597.1 Lippia alba 737 61.11% Non-coding
MN744497.1 Lippia alba 656 62.86% Non-coding
MN744473.1 Lippia alba 653 62.84% Non-coding
MN744519.1 Lippia alba 666 62.22% Non-coding
MN744536.1 Lippia alba 657 62.31% Non-coding
EU761076.1 Lippia alba 650 62.06% Non-coding
MN744582.1 Lippia alba 739 60.81% Non-coding
MN744517.1 Lippia alba 664 62.56% Non-coding
MN744525.1 Lippia alba 659 62.27% Non-coding
MN744579.1 Lippia alba 737 60.57% Non-coding
MN744499.1 Lippia alba 662 62.44% Non-coding
MN744488.1 Lippia alba 658 62.52% Non-coding
MN744523.1 Lippia alba 671 62.20% Non-coding
MN744506.1 Lippia alba 653 62.84% Non-coding
MN744617.1 Lippia alba 737 60.84% Non-coding
MN744498.1 Lippia alba 651 62.58% Non-coding
MN744633.1 Lippia alba 736 61.19% Non-coding
MN744644.1 Lippia alba 737 60.98% Non-coding
EU761075.1 Lippia alba 532 62.29% Non-coding
MN744509.1 Lippia alba 670 62.30% Non-coding
MN744616.1 Lippia alba 736 60.79% Non-coding
MN744593.1 Lippia alba 737 60.84% Non-coding
MN744496.1 Lippia alba 673 62.02% Non-coding
MN744589.1 Lippia alba 737 61.25% Non-coding
MN744588.1 Lippia alba 737 60.98% Non-coding
MN744596.1 Lippia alba 737 60.70% Non-coding
MN744590.1 Lippia alba 737 60.84% Non-coding
MN744624.1 Lippia alba 737 60.84% Non-coding
MN744606.1 Lippia alba 737 60.70% Non-coding
MN744457.1 Lippia alba 662 62.14% Non-coding
LS453192.1 Lippia alba 133 56.72% Non-coding
MN744604.1 Lippia alba 737 60.84% Non-coding
MN744539.1 Lippia alba 646 62.13% Non-coding
LS453187.1 Lippia alba 169 42.94% Non-coding
MN744619.1 Lippia alba 737 60.43% Non-coding
MN744609.1 Lippia alba 737 61.25% Non-coding
MN744581.1 Lippia alba 737 60.98% Non-coding
MN744504.1 Lippia alba 652 62.94% Non-coding
MN744500.1 Lippia alba 649 62.92% Non-coding
MN744467.1 Lippia alba 650 62.83% Non-coding
MN744629.1 Lippia alba 737 60.70% Non-coding
MN744586.1 Lippia alba 737 60.98% Non-coding
MN744533.1 Lippia alba 656 62.56% Non-coding
MN744601.1 Lippia alba 737 60.98% Non-coding
MN744463.1 Lippia alba 659 62.12% Non-coding
MN744611.1 Lippia alba 737 61.25% Non-coding
MN744514.1 Lippia alba 653 62.84% Non-coding
MN744501.1 Lippia alba 655 62.80% Non-coding

* If data is not displayed please access the respective tab

Copyright © 2022 .All rights reserved by CSIR-CIMAP.