Coding Information
| Acc No. | Species Name | Description | Length | GO IDs | GO Names | Enzyme Names | InterPro GO Names | Peptide Information | BLAST | Nucleotide Sequence |
|---|---|---|---|---|---|---|---|---|---|---|
| GU575322.1 | Solanum nigrum | zinc finger protein CONSTANS-LIKE 4-like | 317 | P:GO:0009909; F:GO:0008270; C:GO:0005634 | P:regulation of flower development; F:zinc ion binding; C:nucleus | P:regulation of flower development; F:protein binding | view details | |||
| GU594274.1 | Solanum nigrum | universal stress protein A-like protein | 158 | F:GO:0016208; F:GO:0016787 | F:AMP binding; F:hydrolase activity | Hydrolases | no IPS match | view details | ||
| GU575357.1 | Solanum nigrum | ubiquitin receptor RAD23c | 497 | P:GO:0006289; P:GO:0043161; F:GO:0003684; F:GO:0031593; F:GO:0043130; F:GO:0070628; C:GO:0005654; C:GO:0005829 | P:nucleotide-excision repair; P:proteasome-mediated ubiquitin-dependent protein catabolic process; F:damaged DNA binding; F:polyubiquitin modification-dependent protein binding; F:ubiquitin binding; F:proteasome binding; C:nucleoplasm; C:cytosol | P:nucleotide-excision repair; P:proteasome-mediated ubiquitin-dependent protein catabolic process; F:damaged DNA binding | view details | |||
| GU575353.1 | Solanum nigrum | ubiquitin domain-containing protein DSK2b | 556 | P:GO:0006511; F:GO:0003729; F:GO:0031593; C:GO:0005634; C:GO:0005829 | P:ubiquitin-dependent protein catabolic process; F:mRNA binding; F:polyubiquitin modification-dependent protein binding; C:nucleus; C:cytosol | no GO terms | view details | |||
| GU575348.1 | Solanum nigrum | ubiquitin-conjugating enzyme E2 28 | 402 | P:GO:0000209; P:GO:0006511; F:GO:0005524; F:GO:0061631; C:GO:0005634 | P:protein polyubiquitination; P:ubiquitin-dependent protein catabolic process; F:ATP binding; F:ubiquitin conjugating enzyme activity; C:nucleus | E2 ubiquitin-conjugating enzyme | no GO terms | view details | ||
| GU594257.1 | Solanum nigrum | Ubiquitin-conjugating enzyme E2-17 kDa | 360 | P:GO:0000209; P:GO:0006511; F:GO:0005524; F:GO:0016874; F:GO:0061631; C:GO:0005634 | P:protein polyubiquitination; P:ubiquitin-dependent protein catabolic process; F:ATP binding; F:ligase activity; F:ubiquitin conjugating enzyme activity; C:nucleus | Ligases; E2 ubiquitin-conjugating enzyme | no GO terms | view details | ||
| GU575346.1 | Solanum nigrum | Ubiquitin-conjugating enzyme E2-17 kDa | 340 | P:GO:0000209; P:GO:0006511; F:GO:0005524; F:GO:0016874; F:GO:0061631; C:GO:0005634 | P:protein polyubiquitination; P:ubiquitin-dependent protein catabolic process; F:ATP binding; F:ligase activity; F:ubiquitin conjugating enzyme activity; C:nucleus | Ligases; E2 ubiquitin-conjugating enzyme | no GO terms | view details | ||
| GU575352.1 | Solanum nigrum | ubiquitin-40S ribosomal protein S27a | 389 | P:GO:0006412; P:GO:0016567; P:GO:0019941; F:GO:0003729; F:GO:0003735; F:GO:0031386; F:GO:0031625; F:GO:0046872; C:GO:0005634; C:GO:0005737; C:GO:0005840 | P:translation; P:protein ubiquitination; P:modification-dependent protein catabolic process; F:mRNA binding; F:structural constituent of ribosome; F:protein tag; F:ubiquitin protein ligase binding; F:metal ion binding; C:nucleus; C:cytoplasm; C:ribosome | P:translation; F:structural constituent of ribosome; F:protein binding; C:ribosome | view details | |||
| AM947942.1 | Solanum nigrum | tropinone reductase I | 795 | P:GO:0009710; F:GO:0050356; C:GO:0016021 | P:tropane alkaloid biosynthetic process; F:tropine dehydrogenase activity; C:integral component of membrane | Tropinone reductase I | F:oxidoreductase activity | view details | ||
| GU575364.1 | Solanum nigrum | translation factor GUF1 homolog, chloroplastic | 419 | P:GO:0045727; F:GO:0003924; F:GO:0005525; F:GO:0043022; C:GO:0005743; C:GO:0005759; C:GO:0009507 | P:positive regulation of translation; F:GTPase activity; F:GTP binding; F:ribosome binding; C:mitochondrial inner membrane; C:mitochondrial matrix; C:chloroplast | Acting on acid anhydrides | F:GTP binding | view details | ||
| MT032184.1 | Solanum nigrum | trans-cinnamate 4-monooxygenase | 1518 | F:GO:0004497; F:GO:0005506; F:GO:0016705; F:GO:0020037; C:GO:0016021 | F:monooxygenase activity; F:iron ion binding; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; F:heme binding; C:integral component of membrane | Acting on paired donors, with incorporation or reduction of molecular oxygen. The oxygen incorporated need not be derived from O(2) | F:monooxygenase activity; F:iron ion binding; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; F:heme binding | view details | ||
| GU594270.1 | Solanum nigrum | superoxide dismutase [Fe] 3, chloroplastic isoform X1 | 834 | P:GO:0019430; F:GO:0004784; F:GO:0046872; C:GO:0042644 | P:removal of superoxide radicals; F:superoxide dismutase activity; F:metal ion binding; C:chloroplast nucleoid | Superoxide dismutase | P:superoxide metabolic process; F:superoxide dismutase activity; F:metal ion binding | view details | ||
| GU594242.1 | Solanum nigrum | superoxide dismutase [Cu-Zn], chloroplastic | 450 | P:GO:0019430; F:GO:0004601; F:GO:0004784; F:GO:0005507; C:GO:0009507 | P:removal of superoxide radicals; F:peroxidase activity; F:superoxide dismutase activity; F:copper ion binding; C:chloroplast | Superoxide dismutase; Acting on a peroxide as acceptor | P:superoxide metabolic process; F:metal ion binding | view details | ||
| GU575362.1 | Solanum nigrum | sucrose transporter-like protein | 517 | P:GO:0006817; P:GO:0009611; P:GO:0015770; F:GO:0008506; C:GO:0016021; C:GO:0090406 | P:phosphate ion transport; P:response to wounding; P:sucrose transport; F:sucrose:proton symporter activity; C:integral component of membrane; C:pollen tube | Translocases | no GO terms | view details | ||
| GU575310.1 | Solanum nigrum | sterol 14-demethylase | 523 | P:GO:0016126; P:GO:0032259; F:GO:0004497; F:GO:0005506; F:GO:0008168; F:GO:0016705; F:GO:0020037 | P:sterol biosynthetic process; P:methylation; F:monooxygenase activity; F:iron ion binding; F:methyltransferase activity; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; F:heme binding | Acting on paired donors, with incorporation or reduction of molecular oxygen. The oxygen incorporated need not be derived from O(2); Transferring one-carbon groups | F:monooxygenase activity; F:iron ion binding; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; F:heme binding | view details | ||
| GU575306.1 | Solanum nigrum | stem-specific protein TSJT1 | 411 | no GO terms | view details | |||||
| JX984610.1 | Solanum nigrum | squalene synthase | 1236 | P:GO:0016126; P:GO:0045338; F:GO:0004310; F:GO:0046872; F:GO:0051996; C:GO:0005789; C:GO:0016021 | P:sterol biosynthetic process; P:farnesyl diphosphate metabolic process; F:farnesyl-diphosphate farnesyltransferase activity; F:metal ion binding; F:squalene synthase activity; C:endoplasmic reticulum membrane; C:integral component of membrane | Geranylgeranyl diphosphate synthase; Squalene synthase | P:lipid biosynthetic process; P:biosynthetic process; F:farnesyl-diphosphate farnesyltransferase activity; F:farnesyltranstransferase activity | view details | ||
| GU594256.1 | Solanum nigrum | Serine/threonine-protein phosphatase bsl2 | 617 | P:GO:0006470; P:GO:0009742; F:GO:0017018; F:GO:0046872; C:GO:0005634 | P:protein dephosphorylation; P:brassinosteroid mediated signaling pathway; F:myosin phosphatase activity; F:metal ion binding; C:nucleus | Protein-serine/threonine phosphatase | no GO terms | view details | ||
| GU575341.1 | Solanum nigrum | serine/threonine-protein kinase STN7, chloroplastic | 169 | P:GO:0006468; P:GO:0007623; P:GO:0009643; P:GO:0042548; F:GO:0004674; F:GO:0005524; C:GO:0009507; C:GO:0016021; C:GO:0042651 | P:protein phosphorylation; P:circadian rhythm; P:photosynthetic acclimation; P:regulation of photosynthesis, light reaction; F:protein serine/threonine kinase activity; F:ATP binding; C:chloroplast; C:integral component of membrane; C:thylakoid membrane | Transferring phosphorus-containing groups | F:protein serine/threonine kinase activity; C:thylakoid | view details | ||
| GU575329.1 | Solanum nigrum | RNA-binding protein BRN1-like | 561 | F:GO:0003729; C:GO:0005634; C:GO:0005737; C:GO:1990904 | F:mRNA binding; C:nucleus; C:cytoplasm; C:ribonucleoprotein complex | F:nucleic acid binding; F:RNA binding; C:ribonucleoprotein complex | view details | |||
| GU594245.1 | Solanum nigrum | RING-H2 finger protein ATL80-like | 430 | C:GO:0016021 | C:integral component of membrane | no GO terms | view details | |||
| MN852575.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 522 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| KP149537.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 552 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| JN891549.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 542 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| KR737187.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 504 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| HE963682.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 583 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| GQ436617.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 704 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| MF694774.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 552 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| KR737230.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 553 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| KR736972.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 525 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| MH046938.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 609 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| MF694773.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 495 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| MG251265.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 758 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| JX996056.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 1257 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| MF695008.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 553 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| JX511990.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 608 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| JF944456.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 615 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| EU677013.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 607 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| JF944454.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 615 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| KY661348.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 498 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| MG221803.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 552 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| MN056292.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 723 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| HF572811.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 677 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| MH168549.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 553 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| MW628908.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 502 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| MN056293.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 707 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| JF944457.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 615 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| MK285278.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 557 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| MG251267.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 758 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| MN056291.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 723 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| JF944459.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 615 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| JF944455.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 615 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| KU569178.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 449 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| EU677014.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 617 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| KU556630.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 621 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| KR736921.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 545 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| MG223193.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 552 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| KU743120.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 509 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| JQ412423.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 552 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| KY026194.1 | Solanum nigrum | ribosomal protein S14 | 303 | P:GO:0006412; F:GO:0003735; F:GO:0019843; C:GO:0009507; C:GO:0015935 | P:translation; F:structural constituent of ribosome; F:rRNA binding; C:chloroplast; C:small ribosomal subunit | P:translation; F:structural constituent of ribosome; C:ribosome | view details | |||
| GU575361.1 | Solanum nigrum | ras-related protein Rab2BV-like | 369 | F:GO:0003924; F:GO:0005525; C:GO:0005768 | F:GTPase activity; F:GTP binding; C:endosome | Acting on acid anhydrides | F:GTPase activity; F:GTP binding | view details | ||
| AY547561.1 | Solanum nigrum | R1 | 1500 | P:GO:0009626; F:GO:0005524; F:GO:0043531; C:GO:0005737; C:GO:0016020 | P:plant-type hypersensitive response; F:ATP binding; F:ADP binding; C:cytoplasm; C:membrane | no GO terms | view details | |||
| FN668786.1 | Solanum nigrum | putative Mg-protoporphyrin IX monomethyl ester | 326 | P:GO:0015979; P:GO:0015995; F:GO:0046872; F:GO:0048529; C:GO:0016021 | P:photosynthesis; P:chlorophyll biosynthetic process; F:metal ion binding; F:magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity; C:integral component of membrane | Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase | P:photosynthesis; P:chlorophyll biosynthetic process; F:oxidoreductase activity; F:metal ion binding; F:magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | view details | ||
| GU575366.1 | Solanum nigrum | putative elongation factor TypA-like SVR3, chloroplastic | 279 | P:GO:0006414; F:GO:0003746; F:GO:0003924; F:GO:0005525; C:GO:0043231; C:GO:1990904 | P:translational elongation; F:translation elongation factor activity; F:GTPase activity; F:GTP binding; C:intracellular membrane-bounded organelle; C:ribonucleoprotein complex | Acting on acid anhydrides | no GO terms | view details | ||
| GU594246.1 | Solanum nigrum | protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like | 285 | no GO terms | view details | |||||
| GU594249.1 | Solanum nigrum | protein NRT1/ PTR FAMILY 6.3 | 781 | P:GO:0006817; P:GO:0006857; P:GO:0010167; P:GO:0015706; F:GO:0015112; C:GO:0016021 | P:phosphate ion transport; P:oligopeptide transport; P:response to nitrate; P:nitrate transmembrane transport; F:nitrate transmembrane transporter activity; C:integral component of membrane | Translocases | P:transmembrane transport; F:transmembrane transporter activity; C:membrane | view details | ||
| GU594264.1 | Solanum nigrum | proteasome subunit beta type-4 | 419 | P:GO:0010498; F:GO:0004298; C:GO:0005634; C:GO:0005737; C:GO:0019774 | P:proteasomal protein catabolic process; F:threonine-type endopeptidase activity; C:nucleus; C:cytoplasm; C:proteasome core complex, beta-subunit complex | Acting on peptide bonds (peptidases) | P:proteolysis involved in cellular protein catabolic process; C:proteasome core complex | view details | ||
| GE650052.1 | Solanum nigrum | probable zinc transporter 10 | 207 | P:GO:0071577; F:GO:0005385; C:GO:0005886; C:GO:0016021 | P:zinc ion transmembrane transport; F:zinc ion transmembrane transporter activity; C:plasma membrane; C:integral component of membrane | Translocases | P:metal ion transport; P:transmembrane transport; F:metal ion transmembrane transporter activity; C:membrane | view details | ||
| GU575328.1 | Solanum nigrum | probable WRKY transcription factor 11 | 270 | P:GO:0006355; F:GO:0003700; F:GO:0005516; F:GO:0043565; C:GO:0005634 | P:regulation of transcription, DNA-templated; F:DNA-binding transcription factor activity; F:calmodulin binding; F:sequence-specific DNA binding; C:nucleus | no IPS match | view details | |||
| HQ377509.1 | Solanum nigrum | probable indole-3-acetic acid-amido synthetase GH3.5 isoform X6 | 254 | P:GO:0006952; F:GO:0005524; F:GO:0016881; F:GO:0102053; F:GO:0102057; F:GO:0102058; C:GO:0005737 | P:defense response; F:ATP binding; F:acid-amino acid ligase activity; F:(-)-jasmonoyl-isoleucine synthetase activity; F:jasmonoyl-valine synthetase activity; F:jasmonoyl-leucine synthetase activity; C:cytoplasm | Jasmonoyl--L-amino acid ligase | no GO terms | view details | ||
| GU575318.1 | Solanum nigrum | probable disease resistance protein At4g33300 | 684 | P:GO:0006955; P:GO:0050832; F:GO:0043531 | P:immune response; P:defense response to fungus; F:ADP binding | P:defense response | view details | |||
| GU594268.1 | Solanum nigrum | probable aquaporin TIP1-1 | 438 | P:GO:0006833; P:GO:0055085; F:GO:0015250; C:GO:0009705; C:GO:0016021 | P:water transport; P:transmembrane transport; F:water channel activity; C:plant-type vacuole membrane; C:integral component of membrane | Translocases | P:transmembrane transport; F:channel activity; C:membrane | view details | ||
| GU575296.1 | Solanum nigrum | potassium transporter 2 isoform X1 | 300 | P:GO:0071805; F:GO:0015079; C:GO:0005886; C:GO:0016021 | P:potassium ion transmembrane transport; F:potassium ion transmembrane transporter activity; C:plasma membrane; C:integral component of membrane | Translocases | P:potassium ion transmembrane transport; F:potassium ion transmembrane transporter activity; C:membrane | view details | ||
| GU594250.1 | Solanum nigrum | pollen-specific protein SF21 | 517 | C:GO:0016021 | C:integral component of membrane | no GO terms | view details | |||
| KP245903.1 | Solanum nigrum | phytoene synthase 2, chloroplastic | 457 | P:GO:0016117; F:GO:0004311; F:GO:0016767; C:GO:0009507; C:GO:0016021 | P:carotenoid biosynthetic process; F:farnesyltranstransferase activity; F:geranylgeranyl-diphosphate geranylgeranyltransferase activity; C:chloroplast; C:integral component of membrane | Geranylgeranyl diphosphate synthase; 15-cis-phytoene synthase; (2E,6E)-farnesyl diphosphate synthase | P:biosynthetic process; F:farnesyltranstransferase activity | view details | ||
| MT032183.1 | Solanum nigrum | phenylalanine ammonia-lyase | 2139 | P:GO:0006559; P:GO:0009800; F:GO:0045548; C:GO:0005737 | P:L-phenylalanine catabolic process; P:cinnamic acid biosynthetic process; F:phenylalanine ammonia-lyase activity; C:cytoplasm | Phenylalanine ammonia-lyase; Phenylalanine/tyrosine ammonia-lyase | P:L-phenylalanine catabolic process; F:catalytic activity; F:ammonia-lyase activity; C:cytoplasm | view details | ||
| KP265012.1 | Solanum nigrum | phenylalanine ammonia-lyase | 352 | P:GO:0006559; P:GO:0009800; F:GO:0045548; C:GO:0005737 | P:L-phenylalanine catabolic process; P:cinnamic acid biosynthetic process; F:phenylalanine ammonia-lyase activity; C:cytoplasm | Phenylalanine ammonia-lyase; Phenylalanine/tyrosine ammonia-lyase | F:catalytic activity | view details | ||
| GU575363.1 | Solanum nigrum | Peptide chain release factor 1, mitochondrial | 780 | P:GO:0006417; P:GO:0045892 | P:regulation of translation; P:negative regulation of transcription, DNA-templated | P:negative regulation of transcription, DNA-templated | view details | |||
| AF450276.1 | Solanum nigrum | osmotin-like protein | 744 | P:GO:0031640; P:GO:0050832 | P:killing of cells of another organism; P:defense response to fungus | no GO terms | view details | |||
| KC292261.1 | Solanum nigrum | osmotin-like protein | 744 | P:GO:0006952 | P:defense response | no GO terms | view details | |||
| GU594271.1 | Solanum nigrum | organ-specific protein S2 | 448 | no GO terms | view details | |||||
| GU575309.1 | Solanum nigrum | NADPH--cytochrome P450 reductase | 766 | F:GO:0003958; F:GO:0010181; F:GO:0050660; F:GO:0050661; C:GO:0005789; C:GO:0005829; C:GO:0016021 | F:NADPH-hemoprotein reductase activity; F:FMN binding; F:flavin adenine dinucleotide binding; F:NADP binding; C:endoplasmic reticulum membrane; C:cytosol; C:integral component of membrane | NADPH--hemoprotein reductase | F:oxidoreductase activity | view details | ||
| MF040922.1 | Solanum nigrum | MYB transcription factor | 792 | P:GO:0010597; F:GO:0000976 | P:green leaf volatile biosynthetic process; F:transcription cis-regulatory region binding | no GO terms | view details | |||
| GU594276.1 | Solanum nigrum | Mitochondrial import inner membrane translocase subunit tim8 | 259 | P:GO:0015031; C:GO:0005743; C:GO:0005758 | P:protein transport; C:mitochondrial inner membrane; C:mitochondrial intermembrane space | C:mitochondrial intermembrane space | view details | |||
| GU575298.1 | Solanum nigrum | metal transporter Nramp6-like | 737 | P:GO:0070574; P:GO:0071421; F:GO:0005384; F:GO:0015086; C:GO:0016021 | P:cadmium ion transmembrane transport; P:manganese ion transmembrane transport; F:manganese ion transmembrane transporter activity; F:cadmium ion transmembrane transporter activity; C:integral component of membrane | Translocases | P:metal ion transport; F:metal ion transmembrane transporter activity; C:membrane | view details | ||
| FJ546423.1 | Solanum nigrum | Metallothionein-like protein type 3 | 192 | F:GO:0005507; F:GO:0008270 | F:copper ion binding; F:zinc ion binding | no IPS match | view details | |||
| FJ546424.1 | Solanum nigrum | Metallothionein-like protein type 3 | 192 | P:GO:0006878; F:GO:0005507; F:GO:0008270 | P:cellular copper ion homeostasis; F:copper ion binding; F:zinc ion binding | no IPS match | view details | |||
| EU749407.1 | Solanum nigrum | maturase K | 806 | P:GO:0006397; P:GO:0008033; P:GO:0008380; P:GO:0018108; F:GO:0003723; F:GO:0004715; C:GO:0005739; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:RNA splicing; P:peptidyl-tyrosine phosphorylation; F:RNA binding; F:non-membrane spanning protein tyrosine kinase activity; C:mitochondrion; C:chloroplast | Non-specific protein-tyrosine kinase | P:mRNA processing; C:chloroplast | view details | ||
| MG251283.1 | Solanum nigrum | maturase K | 729 | P:GO:0006397; P:GO:0008033; P:GO:0018108; F:GO:0003723; F:GO:0004715; C:GO:0005739; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:peptidyl-tyrosine phosphorylation; F:RNA binding; F:non-membrane spanning protein tyrosine kinase activity; C:mitochondrion; C:chloroplast | Non-specific protein-tyrosine kinase | P:mRNA processing; C:chloroplast | view details | ||
| JF956492.1 | Solanum nigrum | maturase K | 726 | P:GO:0006397; P:GO:0008033; F:GO:0003723; C:GO:0005739; C:GO:0009507 | P:mRNA processing; P:tRNA processing; F:RNA binding; C:mitochondrion; C:chloroplast | P:mRNA processing; C:chloroplast | view details | |||
| KC535797.1 | Solanum nigrum | maturase K | 1282 | P:GO:0006397; P:GO:0008033; P:GO:0008380; F:GO:0003723; C:GO:0005840; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:RNA splicing; F:RNA binding; C:ribosome; C:chloroplast | P:mRNA processing; C:chloroplast | view details | |||
| HE967493.1 | Solanum nigrum | maturase K | 714 | P:GO:0006397; P:GO:0008033; P:GO:0018108; F:GO:0003723; F:GO:0004715; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:peptidyl-tyrosine phosphorylation; F:RNA binding; F:non-membrane spanning protein tyrosine kinase activity; C:chloroplast | Non-specific protein-tyrosine kinase | P:mRNA processing; C:chloroplast | view details | ||
| KP149508.1 | Solanum nigrum | maturase K | 756 | P:GO:0006397; P:GO:0008033; P:GO:0008380; P:GO:0018108; F:GO:0003723; F:GO:0004715; C:GO:0005739; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:RNA splicing; P:peptidyl-tyrosine phosphorylation; F:RNA binding; F:non-membrane spanning protein tyrosine kinase activity; C:mitochondrion; C:chloroplast | Non-specific protein-tyrosine kinase | P:mRNA processing; C:chloroplast | view details | ||
| MF694878.1 | Solanum nigrum | maturase K | 792 | P:GO:0006397; P:GO:0008033; P:GO:0008380; P:GO:0018108; F:GO:0003723; F:GO:0004715; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:RNA splicing; P:peptidyl-tyrosine phosphorylation; F:RNA binding; F:non-membrane spanning protein tyrosine kinase activity; C:chloroplast | Non-specific protein-tyrosine kinase | P:mRNA processing; C:chloroplast | view details | ||
| KU556676.1 | Solanum nigrum | maturase K | 729 | P:GO:0006397; P:GO:0008033; P:GO:0008380; F:GO:0003723; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:RNA splicing; F:RNA binding; C:chloroplast | P:mRNA processing; C:chloroplast | view details | |||
| MG251284.1 | Solanum nigrum | maturase K | 729 | P:GO:0006397; P:GO:0008033; P:GO:0018108; F:GO:0003723; F:GO:0004715; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:peptidyl-tyrosine phosphorylation; F:RNA binding; F:non-membrane spanning protein tyrosine kinase activity; C:chloroplast | Non-specific protein-tyrosine kinase | P:mRNA processing; C:chloroplast | view details | ||
| HM851098.1 | Solanum nigrum | maturase K | 804 | P:GO:0006397; P:GO:0008033; P:GO:0008380; F:GO:0003723; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:RNA splicing; F:RNA binding; C:chloroplast | P:mRNA processing; C:chloroplast | view details | |||
| JN894604.1 | Solanum nigrum | maturase K | 858 | P:GO:0006397; P:GO:0008033; P:GO:0008380; F:GO:0003723; C:GO:0005840; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:RNA splicing; F:RNA binding; C:ribosome; C:chloroplast | P:mRNA processing; C:chloroplast | view details | |||
| MG251285.1 | Solanum nigrum | maturase K | 729 | P:GO:0006397; P:GO:0008033; P:GO:0018108; F:GO:0003723; F:GO:0004715; C:GO:0005739; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:peptidyl-tyrosine phosphorylation; F:RNA binding; F:non-membrane spanning protein tyrosine kinase activity; C:mitochondrion; C:chloroplast | Non-specific protein-tyrosine kinase | P:mRNA processing; C:chloroplast | view details | ||
| JQ412290.1 | Solanum nigrum | maturase K | 756 | P:GO:0006397; P:GO:0008033; P:GO:0008380; P:GO:0018108; F:GO:0003723; F:GO:0004715; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:RNA splicing; P:peptidyl-tyrosine phosphorylation; F:RNA binding; F:non-membrane spanning protein tyrosine kinase activity; C:chloroplast | Non-specific protein-tyrosine kinase | P:mRNA processing; C:chloroplast | view details | ||
| JF956497.1 | Solanum nigrum | maturase K | 726 | P:GO:0006397; P:GO:0008033; P:GO:0018108; F:GO:0003723; F:GO:0004715; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:peptidyl-tyrosine phosphorylation; F:RNA binding; F:non-membrane spanning protein tyrosine kinase activity; C:chloroplast | Non-specific protein-tyrosine kinase | P:mRNA processing; C:chloroplast | view details | ||
| KR734922.1 | Solanum nigrum | maturase K | 735 | P:GO:0006397; P:GO:0008033; P:GO:0018108; F:GO:0003723; F:GO:0004715; C:GO:0005739; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:peptidyl-tyrosine phosphorylation; F:RNA binding; F:non-membrane spanning protein tyrosine kinase activity; C:mitochondrion; C:chloroplast | Non-specific protein-tyrosine kinase | P:mRNA processing; C:chloroplast | view details | ||
| JF956493.1 | Solanum nigrum | maturase K | 726 | P:GO:0006397; P:GO:0008033; P:GO:0018108; F:GO:0003723; F:GO:0004715; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:peptidyl-tyrosine phosphorylation; F:RNA binding; F:non-membrane spanning protein tyrosine kinase activity; C:chloroplast | Non-specific protein-tyrosine kinase | P:mRNA processing; C:chloroplast | view details | ||
| KR734952.1 | Solanum nigrum | maturase K | 714 | P:GO:0006397; P:GO:0008033; P:GO:0018108; F:GO:0003723; F:GO:0004715; C:GO:0005739; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:peptidyl-tyrosine phosphorylation; F:RNA binding; F:non-membrane spanning protein tyrosine kinase activity; C:mitochondrion; C:chloroplast | Non-specific protein-tyrosine kinase | P:mRNA processing; C:chloroplast | view details | ||
| JF956495.1 | Solanum nigrum | maturase K | 726 | P:GO:0006397; P:GO:0008033; F:GO:0003723; C:GO:0005739; C:GO:0009507 | P:mRNA processing; P:tRNA processing; F:RNA binding; C:mitochondrion; C:chloroplast | P:mRNA processing; C:chloroplast | view details | |||
| KR734731.1 | Solanum nigrum | maturase K | 734 | P:GO:0006397; P:GO:0008033; P:GO:0018108; F:GO:0003723; F:GO:0004715; C:GO:0005739; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:peptidyl-tyrosine phosphorylation; F:RNA binding; F:non-membrane spanning protein tyrosine kinase activity; C:mitochondrion; C:chloroplast | Non-specific protein-tyrosine kinase | P:mRNA processing; C:chloroplast | view details | ||
| KR734764.1 | Solanum nigrum | maturase K | 506 | P:GO:0006397; P:GO:0008033; F:GO:0003723; C:GO:0009507 | P:mRNA processing; P:tRNA processing; F:RNA binding; C:chloroplast | P:mRNA processing; C:chloroplast | view details | |||
| MG946984.1 | Solanum nigrum | maturase K | 881 | P:GO:0006397; P:GO:0008033; P:GO:0008380; F:GO:0003723; C:GO:0005840; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:RNA splicing; F:RNA binding; C:ribosome; C:chloroplast | P:mRNA processing; C:chloroplast | view details | |||
| KR735097.1 | Solanum nigrum | maturase K | 692 | P:GO:0006397; P:GO:0008033; P:GO:0018108; F:GO:0003723; F:GO:0004715; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:peptidyl-tyrosine phosphorylation; F:RNA binding; F:non-membrane spanning protein tyrosine kinase activity; C:chloroplast | Non-specific protein-tyrosine kinase | P:mRNA processing; C:chloroplast | view details | ||
| KR734642.1 | Solanum nigrum | maturase K | 368 | P:GO:0006397; P:GO:0008033; P:GO:0018108; F:GO:0003723; F:GO:0004715; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:peptidyl-tyrosine phosphorylation; F:RNA binding; F:non-membrane spanning protein tyrosine kinase activity; C:chloroplast | Non-specific protein-tyrosine kinase | no IPS match | view details | ||
| EU749406.1 | Solanum nigrum | maturase K | 806 | P:GO:0006397; P:GO:0008033; P:GO:0008380; P:GO:0018108; F:GO:0003723; F:GO:0004715; C:GO:0005739; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:RNA splicing; P:peptidyl-tyrosine phosphorylation; F:RNA binding; F:non-membrane spanning protein tyrosine kinase activity; C:mitochondrion; C:chloroplast | Non-specific protein-tyrosine kinase | P:mRNA processing; C:chloroplast | view details | ||
| MG748839.1 | Solanum nigrum | maturase K | 586 | P:GO:0006397; P:GO:0008033; F:GO:0003723; C:GO:0009507 | P:mRNA processing; P:tRNA processing; F:RNA binding; C:chloroplast | P:mRNA processing; C:chloroplast | view details | |||
| JN894603.1 | Solanum nigrum | maturase K | 788 | P:GO:0006397; P:GO:0008033; P:GO:0008380; P:GO:0018108; F:GO:0003723; F:GO:0004715; C:GO:0005739; C:GO:0005840; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:RNA splicing; P:peptidyl-tyrosine phosphorylation; F:RNA binding; F:non-membrane spanning protein tyrosine kinase activity; C:mitochondrion; C:ribosome; C:chloroplast | Non-specific protein-tyrosine kinase | P:mRNA processing; C:chloroplast | view details | ||
| FN668839.1 | Solanum nigrum | maturase K | 837 | P:GO:0006397; P:GO:0008033; P:GO:0008380; F:GO:0003723; C:GO:0005840; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:RNA splicing; F:RNA binding; C:ribosome; C:chloroplast | P:mRNA processing; C:chloroplast | view details | |||
| JX511978.1 | Solanum nigrum | maturase K | 825 | P:GO:0006397; P:GO:0008033; P:GO:0008380; P:GO:0018108; F:GO:0003723; F:GO:0004715; C:GO:0005739; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:RNA splicing; P:peptidyl-tyrosine phosphorylation; F:RNA binding; F:non-membrane spanning protein tyrosine kinase activity; C:mitochondrion; C:chloroplast | Non-specific protein-tyrosine kinase | P:mRNA processing; C:chloroplast | view details | ||
| JF956494.1 | Solanum nigrum | maturase K | 726 | P:GO:0006397; P:GO:0008033; F:GO:0003723; C:GO:0005739; C:GO:0009507 | P:mRNA processing; P:tRNA processing; F:RNA binding; C:mitochondrion; C:chloroplast | P:mRNA processing; C:chloroplast | view details | |||
| JX996062.1 | Solanum nigrum | maturase K | 818 | P:GO:0006397; P:GO:0008033; P:GO:0008380; F:GO:0003723; C:GO:0005739; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:RNA splicing; F:RNA binding; C:mitochondrion; C:chloroplast | P:mRNA processing; C:chloroplast | view details | |||
| HQ377507.1 | Solanum nigrum | linoleate 13S-lipoxygenase 3-1, chloroplastic | 444 | P:GO:0006633; P:GO:0009695; P:GO:0031408; P:GO:0034440; F:GO:0016165; F:GO:0046872; C:GO:0009534; C:GO:0009570 | P:fatty acid biosynthetic process; P:jasmonic acid biosynthetic process; P:oxylipin biosynthetic process; P:lipid oxidation; F:linoleate 13S-lipoxygenase activity; F:metal ion binding; C:chloroplast thylakoid; C:chloroplast stroma | Linoleate 13S-lipoxygenase | F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; F:metal ion binding | view details | ||
| GU575308.1 | Solanum nigrum | LIM domain-containing protein WLIM1 | 357 | P:GO:0051017; F:GO:0046872; F:GO:0051015; C:GO:0005886; C:GO:0015629 | P:actin filament bundle assembly; F:metal ion binding; F:actin filament binding; C:plasma membrane; C:actin cytoskeleton | F:actin filament binding | view details | |||
| GU594272.1 | Solanum nigrum | L-ascorbate peroxidase 1, cytosolic | 579 | P:GO:0000302; P:GO:0034599; P:GO:0042744; P:GO:0098869; F:GO:0016688; F:GO:0020037; F:GO:0046872; C:GO:0009507 | P:response to reactive oxygen species; P:cellular response to oxidative stress; P:hydrogen peroxide catabolic process; P:cellular oxidant detoxification; F:L-ascorbate peroxidase activity; F:heme binding; F:metal ion binding; C:chloroplast | L-ascorbate peroxidase | P:response to oxidative stress; P:cellular response to oxidative stress; F:peroxidase activity; F:heme binding | view details | ||
| JQ815390.1 | Solanum nigrum | Kunitz-type inhibitor A | 571 | P:GO:0010951; F:GO:0004867; F:GO:0019828; C:GO:0005773 | P:negative regulation of endopeptidase activity; F:serine-type endopeptidase inhibitor activity; F:aspartic-type endopeptidase inhibitor activity; C:vacuole | F:endopeptidase inhibitor activity | view details | |||
| JQ815388.1 | Solanum nigrum | Kunitz-type inhibitor A | 567 | P:GO:0010951; F:GO:0004867; F:GO:0019828; C:GO:0005773 | P:negative regulation of endopeptidase activity; F:serine-type endopeptidase inhibitor activity; F:aspartic-type endopeptidase inhibitor activity; C:vacuole | F:endopeptidase inhibitor activity | view details | |||
| GU575324.1 | Solanum nigrum | Inactive LRR receptor-like serine/threonine-protein kinase bir2 | 237 | P:GO:0006468; P:GO:0006955; P:GO:0098542; F:GO:0004672; F:GO:0005524; C:GO:0016021 | P:protein phosphorylation; P:immune response; P:defense response to other organism; F:protein kinase activity; F:ATP binding; C:integral component of membrane | Transferring phosphorus-containing groups | no GO terms | view details | ||
| GU575359.1 | Solanum nigrum | hypersensitive-induced response protein 1-like | 555 | C:GO:0005737; C:GO:0043231 | C:cytoplasm; C:intracellular membrane-bounded organelle | no GO terms | view details | |||
| GU594254.1 | Solanum nigrum | heat shock protein 90-6, mitochondrial | 605 | P:GO:0006457; F:GO:0005524; F:GO:0008194; F:GO:0016887; F:GO:0048531; F:GO:0051082; C:GO:0000139; C:GO:0005783; C:GO:0009570; C:GO:0048471 | P:protein folding; F:ATP binding; F:UDP-glycosyltransferase activity; F:ATP hydrolysis activity; F:beta-1,3-galactosyltransferase activity; F:unfolded protein binding; C:Golgi membrane; C:endoplasmic reticulum; C:chloroplast stroma; C:perinuclear region of cytoplasm | Acting on acid anhydrides; Glycosyltransferases | P:protein folding; F:ATP binding; F:ATP hydrolysis activity; F:unfolded protein binding | view details | ||
| GU575344.1 | Solanum nigrum | heat shock 70 kDa protein 15-like | 668 | P:GO:0006457; F:GO:0005524; F:GO:0016887; C:GO:0005634; C:GO:0005829 | P:protein folding; F:ATP binding; F:ATP hydrolysis activity; C:nucleus; C:cytosol | Acting on acid anhydrides | F:ATP binding; F:ATP-dependent protein folding chaperone | view details | ||
| GU575365.1 | Solanum nigrum | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 | 363 | P:GO:0006468; P:GO:0048544; F:GO:0004674; F:GO:0004712; F:GO:0005524; F:GO:0030246; F:GO:0106310; C:GO:0016021 | P:protein phosphorylation; P:recognition of pollen; F:protein serine/threonine kinase activity; F:protein serine/threonine/tyrosine kinase activity; F:ATP binding; F:carbohydrate binding; F:protein serine kinase activity; C:integral component of membrane | Dual-specificity kinase | P:protein phosphorylation; F:protein kinase activity; F:ATP binding | view details | ||
| GU575330.1 | Solanum nigrum | glutathione S-transferase zeta class-like | 290 | P:GO:0006559; P:GO:0006749; F:GO:0004364; F:GO:0016034; C:GO:0005737 | P:L-phenylalanine catabolic process; P:glutathione metabolic process; F:glutathione transferase activity; F:maleylacetoacetate isomerase activity; C:cytoplasm | Glutathione transferase; Maleylacetoacetate isomerase | no GO terms | view details | ||
| GU575312.1 | Solanum nigrum | glutathione S-transferase T1 | 484 | P:GO:0006749; F:GO:0004364 | P:glutathione metabolic process; F:glutathione transferase activity | Glutathione transferase | P:glutathione metabolic process; F:protein binding | view details | ||
| GU594273.1 | Solanum nigrum | glutathione reductase, chloroplastic | 731 | P:GO:0006749; P:GO:0045454; P:GO:0098869; F:GO:0004362; F:GO:0004791; F:GO:0050660; F:GO:0050661; C:GO:0009507 | P:glutathione metabolic process; P:cell redox homeostasis; P:cellular oxidant detoxification; F:glutathione-disulfide reductase (NADPH) activity; F:thioredoxin-disulfide reductase activity; F:flavin adenine dinucleotide binding; F:NADP binding; C:chloroplast | Glutathione-disulfide reductase; Thioredoxin-disulfide reductase; Protein-disulfide reductase | F:oxidoreductase activity | view details | ||
| HQ853403.1 | Solanum nigrum | floral homeotic protein PMADS 1 | 636 | P:GO:0010093; P:GO:0045944; F:GO:0000978; F:GO:0000981; F:GO:0046983; C:GO:0005634 | P:specification of floral organ identity; P:positive regulation of transcription by RNA polymerase II; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; F:DNA-binding transcription factor activity, RNA polymerase II-specific; F:protein dimerization activity; C:nucleus | P:regulation of transcription, DNA-templated; F:DNA binding; F:DNA-binding transcription factor activity; F:protein dimerization activity; C:nucleus | view details | |||
| AY574951.1 | Solanum nigrum | elongation factor 1-alpha | 215 | P:GO:0006414; F:GO:0003746; F:GO:0005525; C:GO:0043229 | P:translational elongation; F:translation elongation factor activity; F:GTP binding; C:intracellular organelle | no GO terms | view details | |||
| GU575337.1 | Solanum nigrum | E3 ubiquitin-protein ligase MIEL1-like | 431 | P:GO:0006511; P:GO:0016567; F:GO:0008270; F:GO:0061630; C:GO:0005634 | P:ubiquitin-dependent protein catabolic process; P:protein ubiquitination; F:zinc ion binding; F:ubiquitin protein ligase activity; C:nucleus | Transferases | P:protein ubiquitination; F:zinc ion binding | view details | ||
| GU575351.1 | Solanum nigrum | E3 ubiquitin-protein ligase COP1 | 521 | P:GO:0016567; P:GO:0043161; F:GO:0046872; F:GO:0061630 | P:protein ubiquitination; P:proteasome-mediated ubiquitin-dependent protein catabolic process; F:metal ion binding; F:ubiquitin protein ligase activity | Transferases | F:ubiquitin protein ligase activity | view details | ||
| GU575326.1 | Solanum nigrum | double WRKY type transfactor | 464 | P:GO:0006355; F:GO:0003700; F:GO:0043565; C:GO:0005634 | P:regulation of transcription, DNA-templated; F:DNA-binding transcription factor activity; F:sequence-specific DNA binding; C:nucleus | P:regulation of transcription, DNA-templated; F:DNA-binding transcription factor activity; F:sequence-specific DNA binding | view details | |||
| GU594260.1 | Solanum nigrum | dnaJ protein homolog | 379 | P:GO:0009408; P:GO:0042026; F:GO:0005524; F:GO:0030544; F:GO:0046872; F:GO:0051082; F:GO:0051087; C:GO:0005634; C:GO:0005829 | P:response to heat; P:protein refolding; F:ATP binding; F:Hsp70 protein binding; F:metal ion binding; F:unfolded protein binding; F:chaperone binding; C:nucleus; C:cytosol | P:protein folding; F:Hsp70 protein binding; F:unfolded protein binding | view details | |||
| AF421898.1 | Solanum nigrum | disease resistance protein RGH3 | 1432 | P:GO:0006457; P:GO:0006955; P:GO:0098542; F:GO:0043014; F:GO:0043531 | P:protein folding; P:immune response; P:defense response to other organism; F:alpha-tubulin binding; F:ADP binding | P:protein folding; F:alpha-tubulin binding | view details | |||
| GU575304.1 | Solanum nigrum | delta(24)-sterol reductase-like | 377 | P:GO:0008202; F:GO:0050614; F:GO:0071949; C:GO:0005737; C:GO:0016021 | P:steroid metabolic process; F:delta24-sterol reductase activity; F:FAD binding; C:cytoplasm; C:integral component of membrane | Delta(24)-sterol reductase | no GO terms | view details | ||
| GU575305.1 | Solanum nigrum | delta(24)-sterol reductase | 764 | P:GO:0008202; F:GO:0050614; F:GO:0071949; C:GO:0005737; C:GO:0016021 | P:steroid metabolic process; F:delta24-sterol reductase activity; F:FAD binding; C:cytoplasm; C:integral component of membrane | Delta(24)-sterol reductase | F:oxidoreductase activity; F:flavin adenine dinucleotide binding; F:FAD binding | view details | ||
| GU575358.1 | Solanum nigrum | D-cysteine desulfhydrase | 158 | P:GO:0008152; F:GO:0003824; F:GO:0019148 | P:metabolic process; F:catalytic activity; F:D-cysteine desulfhydrase activity | no IPS match | view details | |||
| AX324316.1 | Solanum nigrum | D1 | 121 | P:GO:0009772; P:GO:0018298; F:GO:0016168; F:GO:0045156; F:GO:0046872; C:GO:0009507; C:GO:0009523; C:GO:0016021; C:GO:0031676; C:GO:0042170 | P:photosynthetic electron transport in photosystem II; P:protein-chromophore linkage; F:chlorophyll binding; F:electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; F:metal ion binding; C:chloroplast; C:photosystem II; C:integral component of membrane; C:plasma membrane-derived thylakoid membrane; C:plastid membrane | Oxidoreductases | P:photosynthetic electron transport in photosystem II; P:photosynthesis, light reaction; F:electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | view details | ||
| MT032186.1 | Solanum nigrum | cytochrome P450 98A2-like | 1533 | F:GO:0005506; F:GO:0016709; F:GO:0020037; C:GO:0016021 | F:iron ion binding; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen; F:heme binding; C:integral component of membrane | Acting on paired donors, with incorporation or reduction of molecular oxygen. The oxygen incorporated need not be derived from O(2) | F:monooxygenase activity; F:iron ion binding; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; F:heme binding | view details | ||
| EU701225.1 | Solanum nigrum | cytochrome oxidase subunit 1 | 655 | P:GO:0006119; P:GO:0022900; P:GO:1902600; F:GO:0004129; F:GO:0020037; F:GO:0046872; C:GO:0005743; C:GO:0016021; C:GO:0045277 | P:oxidative phosphorylation; P:electron transport chain; P:proton transmembrane transport; F:cytochrome-c oxidase activity; F:heme binding; F:metal ion binding; C:mitochondrial inner membrane; C:integral component of membrane; C:respiratory chain complex IV | Acting on a heme group of donors; Cytochrome-c oxidase | P:aerobic respiration; F:cytochrome-c oxidase activity; F:heme binding; C:integral component of membrane | view details | ||
| EU701226.1 | Solanum nigrum | cytochrome oxidase subunit 1 | 655 | P:GO:0006119; P:GO:0022900; P:GO:1902600; F:GO:0004129; F:GO:0020037; F:GO:0046872; C:GO:0005743; C:GO:0016021; C:GO:0045277 | P:oxidative phosphorylation; P:electron transport chain; P:proton transmembrane transport; F:cytochrome-c oxidase activity; F:heme binding; F:metal ion binding; C:mitochondrial inner membrane; C:integral component of membrane; C:respiratory chain complex IV | Acting on a heme group of donors; Cytochrome-c oxidase | P:aerobic respiration; F:cytochrome-c oxidase activity; F:heme binding; C:integral component of membrane | view details | ||
| MT032188.1 | Solanum nigrum | crocetin glucosyltransferase, chloroplastic-like | 1422 | P:GO:0009787; P:GO:0009835; P:GO:0009845; P:GO:0080148; F:GO:0010294; F:GO:0047215; F:GO:0080043; F:GO:0080044; C:GO:0005634; C:GO:0005737 | P:regulation of abscisic acid-activated signaling pathway; P:fruit ripening; P:seed germination; P:negative regulation of response to water deprivation; F:abscisic acid glucosyltransferase activity; F:indole-3-acetate beta-glucosyltransferase activity; F:quercetin 3-O-glucosyltransferase activity; F:quercetin 7-O-glucosyltransferase activity; C:nucleus; C:cytoplasm | Indole-3-acetate beta-glucosyltransferase | F:UDP-glycosyltransferase activity | view details | ||
| HQ377508.1 | Solanum nigrum | coronatine-insensitive protein 1 | 469 | P:GO:0006955; P:GO:0031146; P:GO:0098542; F:GO:0005515; C:GO:0019005 | P:immune response; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; P:defense response to other organism; F:protein binding; C:SCF ubiquitin ligase complex | no GO terms | view details | |||
| GU575343.1 | Solanum nigrum | Chaperone protein dnaJ 2 | 252 | P:GO:0009408; P:GO:0042026; F:GO:0005524; F:GO:0030544; F:GO:0046872; F:GO:0051082; F:GO:0051087; C:GO:0005829 | P:response to heat; P:protein refolding; F:ATP binding; F:Hsp70 protein binding; F:metal ion binding; F:unfolded protein binding; F:chaperone binding; C:cytosol | P:protein folding; F:Hsp70 protein binding | view details | |||
| GU575345.1 | Solanum nigrum | chaperone protein DnaJ | 654 | P:GO:0009408; P:GO:0042026; P:GO:0051085; F:GO:0005524; F:GO:0031072; F:GO:0046872; F:GO:0051082; C:GO:0009507 | P:response to heat; P:protein refolding; P:chaperone cofactor-dependent protein refolding; F:ATP binding; F:heat shock protein binding; F:metal ion binding; F:unfolded protein binding; C:chloroplast | P:protein folding; F:heat shock protein binding; F:unfolded protein binding | view details | |||
| MT032187.1 | Solanum nigrum | chalcone flavanone isomerase | 654 | P:GO:0009813; F:GO:0045430 | P:flavonoid biosynthetic process; F:chalcone isomerase activity | Chalcone isomerase | P:flavonoid biosynthetic process; F:intramolecular lyase activity; F:chalcone isomerase activity | view details | ||
| GU575331.1 | Solanum nigrum | catalase isozyme 1 | 547 | P:GO:0042542; P:GO:0042744; P:GO:0098869; F:GO:0004096; F:GO:0020037; F:GO:0046872; C:GO:0005886; C:GO:0009514 | P:response to hydrogen peroxide; P:hydrogen peroxide catabolic process; P:cellular oxidant detoxification; F:catalase activity; F:heme binding; F:metal ion binding; C:plasma membrane; C:glyoxysome | Catalase | P:response to oxidative stress; F:catalase activity; F:heme binding | view details | ||
| GU575332.1 | Solanum nigrum | Catalase | 73 | P:GO:0006979; P:GO:0042744; P:GO:0098869; F:GO:0004096; F:GO:0020037; F:GO:0046872; C:GO:0005777 | P:response to oxidative stress; P:hydrogen peroxide catabolic process; P:cellular oxidant detoxification; F:catalase activity; F:heme binding; F:metal ion binding; C:peroxisome | Catalase | no IPS match | view details | ||
| GE650047.1 | Solanum nigrum | catalase | 191 | P:GO:0042542; P:GO:0042744; P:GO:0098869; F:GO:0004096; F:GO:0020037; F:GO:0046872; C:GO:0005886; C:GO:0009514 | P:response to hydrogen peroxide; P:hydrogen peroxide catabolic process; P:cellular oxidant detoxification; F:catalase activity; F:heme binding; F:metal ion binding; C:plasma membrane; C:glyoxysome | Catalase | no IPS match | view details | ||
| GU575325.1 | Solanum nigrum | Calmodulin-binding transcription activator 5 | 465 | P:GO:0006357; P:GO:2000112; F:GO:0003690; F:GO:0003712; F:GO:0005516; C:GO:0005634; C:GO:0016021 | P:regulation of transcription by RNA polymerase II; P:regulation of cellular macromolecule biosynthetic process; F:double-stranded DNA binding; F:transcription coregulator activity; F:calmodulin binding; C:nucleus; C:integral component of membrane | F:protein binding | view details | |||
| GU575354.1 | Solanum nigrum | calcium-dependent protein kinase 10-like | 804 | P:GO:0006970; P:GO:0010152; P:GO:0018105; P:GO:0035556; P:GO:0046777; P:GO:1902584; F:GO:0004683; F:GO:0005509; F:GO:0005516; F:GO:0005524; F:GO:0009931; C:GO:0005634; C:GO:0005737; C:GO:0005886 | P:response to osmotic stress; P:pollen maturation; P:peptidyl-serine phosphorylation; P:intracellular signal transduction; P:protein autophosphorylation; P:positive regulation of response to water deprivation; F:calmodulin-dependent protein kinase activity; F:calcium ion binding; F:calmodulin binding; F:ATP binding; F:calcium-dependent protein serine/threonine kinase activity; C:nucleus; C:cytoplasm; C:plasma membrane | Calcium/calmodulin-dependent protein kinase | P:protein phosphorylation; F:protein kinase activity; F:calcium ion binding; F:ATP binding | view details | ||
| GU575299.1 | Solanum nigrum | bifunctional L-3-cyanoalanine synthase/cysteine synthase 1, mitochondrial | 826 | P:GO:0006535; P:GO:0019499; F:GO:0004124; F:GO:0050017; C:GO:0005739 | P:cysteine biosynthetic process from serine; P:cyanide metabolic process; F:cysteine synthase activity; F:L-3-cyanoalanine synthase activity; C:mitochondrion | L-3-cyanoalanine synthase; Cysteine synthase | P:cysteine biosynthetic process from serine; P:cyanide metabolic process; F:cysteine synthase activity; F:L-3-cyanoalanine synthase activity; C:mitochondrion | view details | ||
| GU575355.1 | Solanum nigrum | auxin-responsive protein IAA17-like | 351 | P:GO:0006355; P:GO:0009734; C:GO:0005634 | P:regulation of transcription, DNA-templated; P:auxin-activated signaling pathway; C:nucleus | P:regulation of transcription, DNA-templated; C:nucleus | view details | |||
| GU594265.1 | Solanum nigrum | auxin response factor 4 | 242 | P:GO:0006355; P:GO:0009734; P:GO:0010050; P:GO:0010158; F:GO:0000976; C:GO:0005634 | P:regulation of transcription, DNA-templated; P:auxin-activated signaling pathway; P:vegetative phase change; P:abaxial cell fate specification; F:transcription cis-regulatory region binding; C:nucleus | P:regulation of transcription, DNA-templated; P:response to hormone; F:DNA binding | view details | |||
| GU594255.1 | Solanum nigrum | Auxin-binding protein ABP19a | 288 | F:GO:0030145; C:GO:0048046 | F:manganese ion binding; C:apoplast | no GO terms | view details | |||
| GE650053.1 | Solanum nigrum | ascorbate peroxidase | 169 | P:GO:0000302; P:GO:0034599; P:GO:0042744; P:GO:0098869; F:GO:0016688; F:GO:0020037; F:GO:0046872; C:GO:0009507 | P:response to reactive oxygen species; P:cellular response to oxidative stress; P:hydrogen peroxide catabolic process; P:cellular oxidant detoxification; F:L-ascorbate peroxidase activity; F:heme binding; F:metal ion binding; C:chloroplast | L-ascorbate peroxidase | P:response to oxidative stress; P:cellular response to oxidative stress; F:peroxidase activity; F:heme binding | view details | ||
| GU594261.1 | Solanum nigrum | aquaporin TIP2-1-like | 235 | P:GO:0006833; P:GO:0055085; F:GO:0015250; C:GO:0016021 | P:water transport; P:transmembrane transport; F:water channel activity; C:integral component of membrane | Translocases | P:transmembrane transport; F:channel activity; C:membrane | view details | ||
| KY978750.1 | Solanum nigrum | acylsugar acyltransferase 3-like | 1290 | F:GO:0016747 | F:acyltransferase activity, transferring groups other than amino-acyl groups | Acyltransferases | no GO terms | view details | ||
| GU575317.1 | Solanum nigrum | ABC transporter G family member 35-like | 937 | P:GO:0055085; F:GO:0005524; F:GO:0140359; C:GO:0005886; C:GO:0016021 | P:transmembrane transport; F:ATP binding; F:ABC-type transporter activity; C:plasma membrane; C:integral component of membrane | Translocases | F:ABC-type transporter activity; C:membrane | view details | ||
| KY448291.1 | Solanum nigrum | ABC transporter C family member 5 | 633 | P:GO:0055085; F:GO:0005524; F:GO:0140359; C:GO:0016021 | P:transmembrane transport; F:ATP binding; F:ABC-type transporter activity; C:integral component of membrane | Translocases | F:ATP binding | view details | ||
| GU575367.1 | Solanum nigrum | ABC transporter B family member 28 | 607 | P:GO:0055085; F:GO:0005524; F:GO:0140359; C:GO:0009536; C:GO:0016021 | P:transmembrane transport; F:ATP binding; F:ABC-type transporter activity; C:plastid; C:integral component of membrane | Translocases | F:ATP binding | view details | ||
| DQ229901.1 | Solanum nigrum | 3-hydroxy-3-methylglutaryl coenzyme A reductase 1 | 582 | P:GO:0008299; P:GO:0015936; P:GO:0016126; F:GO:0004420; C:GO:0005778; C:GO:0005789; C:GO:0016021 | P:isoprenoid biosynthetic process; P:coenzyme A metabolic process; P:sterol biosynthetic process; F:hydroxymethylglutaryl-CoA reductase (NADPH) activity; C:peroxisomal membrane; C:endoplasmic reticulum membrane; C:integral component of membrane | Hydroxymethylglutaryl-CoA reductase (NADPH) | P:coenzyme A metabolic process; F:hydroxymethylglutaryl-CoA reductase (NADPH) activity; F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | view details | ||
| GU594262.1 | Solanum nigrum | 2-oxoglutarate-dependent dioxygenase AOP3-like | 674 | P:GO:0002238; P:GO:0009805; F:GO:0016706; F:GO:0031418 | P:response to molecule of fungal origin; P:coumarin biosynthetic process; F:2-oxoglutarate-dependent dioxygenase activity; F:L-ascorbic acid binding | Acting on paired donors, with incorporation or reduction of molecular oxygen. The oxygen incorporated need not be derived from O(2) | no GO terms | view details | ||
| GU575307.1 | Solanum nigrum | 2-hydroxyisoflavanone dehydratase | 409 | F:GO:0016787 | F:hydrolase activity | Hydrolases | F:hydrolase activity | view details | ||
| GU575342.1 | Solanum nigrum | 17.6 kDa class I heat shock protein-like | 503 | P:GO:0006457; P:GO:0009408; P:GO:0009651; P:GO:0042542; P:GO:0051259; F:GO:0043621; F:GO:0051082; C:GO:0005737 | P:protein folding; P:response to heat; P:response to salt stress; P:response to hydrogen peroxide; P:protein complex oligomerization; F:protein self-association; F:unfolded protein binding; C:cytoplasm | no GO terms | view details | |||
| GU575302.1 | Solanum nigrum | 14-3-3 protein 10 | 714 | P:GO:0007165; P:GO:0034613; C:GO:0005737 | P:signal transduction; P:cellular protein localization; C:cytoplasm | no GO terms | view details | |||
| GU575303.1 | Solanum nigrum | 14-3-3-like protein | 308 | P:GO:0007165; P:GO:0034613; C:GO:0005737 | P:signal transduction; P:cellular protein localization; C:cytoplasm | no GO terms | view details | |||
| MK285277.1 | Solanum nigrum | 558 | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||||||
| AF450277.1 | Solanum nigrum | 621 | no GO terms | view details | ||||||
| AF473702.2 | Solanum nigrum | 744 | no GO terms | view details | ||||||
| FJ546425.1 | Solanum nigrum | Metallothionein-like protein type 3 | 198 | P:GO:0006878; F:GO:0005507; F:GO:0008270 | P:cellular copper ion homeostasis; F:copper ion binding; F:zinc ion binding | no IPS match | view details | |||
| KC535803.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 1404 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| MG946866.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 1386 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| GU594252.1 | Solanum nigrum | vacuolar protein sorting-associated protein 52 A-like | 948 | P:GO:0006896; P:GO:0015031; P:GO:0032456; P:GO:0042147; F:GO:0019905; C:GO:0000938; C:GO:0005829 | P:Golgi to vacuole transport; P:protein transport; P:endocytic recycling; P:retrograde transport, endosome to Golgi; F:syntaxin binding; C:GARP complex; C:cytosol | no GO terms | view details | |||
| MT782383.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 692 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| GU575301.1 | Solanum nigrum | stem-specific protein TSJT1-like | 457 | no GO terms | view details | |||||
| JF944458.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 615 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| GU575323.1 | Solanum nigrum | homeobox-leucine zipper protein HAT22-like | 396 | P:GO:0006357; F:GO:0000981; F:GO:0043565; C:GO:0005634 | P:regulation of transcription by RNA polymerase II; F:DNA-binding transcription factor activity, RNA polymerase II-specific; F:sequence-specific DNA binding; C:nucleus | no IPS match | view details | |||
| KX258744.1 | Solanum nigrum | maturase K | 936 | P:GO:0006397; P:GO:0008033; P:GO:0008380; F:GO:0003723; C:GO:0005840; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:RNA splicing; F:RNA binding; C:ribosome; C:chloroplast | P:mRNA processing; C:chloroplast | view details | |||
| MT032185.1 | Solanum nigrum | 4-coumarate--CoA ligase 1 | 1638 | P:GO:0009698; F:GO:0005524; F:GO:0016207 | P:phenylpropanoid metabolic process; F:ATP binding; F:4-coumarate-CoA ligase activity | 4-coumarate--CoA ligase | no GO terms | view details | ||
| KY293568.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 587 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| GU594248.1 | Solanum nigrum | Auxin-responsive protein IAA9 | 155 | P:GO:0006355; P:GO:0009734; C:GO:0005634 | P:regulation of transcription, DNA-templated; P:auxin-activated signaling pathway; C:nucleus | no IPS match | view details | |||
| FN675928.1 | Solanum nigrum | putative sulfolipid biosynthesis protein | 262 | C:GO:0009507 | C:chloroplast | no IPS match | view details | |||
| MF694772.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 378 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:ribulose-bisphosphate carboxylase activity | view details | ||
| GU575311.1 | Solanum nigrum | probable glutathione peroxidase 2 | 329 | P:GO:0006979; P:GO:0098869; F:GO:0004602; C:GO:0005829 | P:response to oxidative stress; P:cellular oxidant detoxification; F:glutathione peroxidase activity; C:cytosol | Glutathione peroxidase | P:response to oxidative stress; F:glutathione peroxidase activity | view details | ||
| MT032190.1 | Solanum nigrum | shikimate O-hydroxycinnamoyltransferase | 1308 | F:GO:0047172 | F:shikimate O-hydroxycinnamoyltransferase activity | Shikimate O-hydroxycinnamoyltransferase | no GO terms | view details | ||
| GU133373.1 | Solanum nigrum | trypsin proteinase inhibitor precursor | 524 | P:GO:0010951; F:GO:0004867 | P:negative regulation of endopeptidase activity; F:serine-type endopeptidase inhibitor activity | F:serine-type endopeptidase inhibitor activity | view details | |||
| GU575334.1 | Solanum nigrum | NADPH--cytochrome P450 reductase-like | 424 | F:GO:0003958; F:GO:0010181; F:GO:0050660; F:GO:0050661; C:GO:0005789; C:GO:0005829; C:GO:0016021 | F:NADPH-hemoprotein reductase activity; F:FMN binding; F:flavin adenine dinucleotide binding; F:NADP binding; C:endoplasmic reticulum membrane; C:cytosol; C:integral component of membrane | NADPH--hemoprotein reductase | F:oxidoreductase activity | view details | ||
| GU594266.1 | Solanum nigrum | Aquaporin TIP2-1 | 395 | P:GO:0006833; P:GO:0055085; F:GO:0015250; C:GO:0016021 | P:water transport; P:transmembrane transport; F:water channel activity; C:integral component of membrane | Translocases | P:transmembrane transport; F:channel activity; C:membrane | view details | ||
| KP064043.1 | Solanum nigrum | metal-nicotianamine transporter YSL2-like isoform X1 | 2061 | P:GO:0010039; P:GO:0033214; P:GO:0035672; P:GO:0048316; F:GO:0035673; F:GO:0051980; C:GO:0005886; C:GO:0016021 | P:response to iron ion; P:siderophore-dependent iron import into cell; P:oligopeptide transmembrane transport; P:seed development; F:oligopeptide transmembrane transporter activity; F:iron-nicotianamine transmembrane transporter activity; C:plasma membrane; C:integral component of membrane | Translocases | F:oligopeptide transmembrane transporter activity | view details | ||
| EU749405.1 | Solanum nigrum | maturase K | 737 | P:GO:0006397; P:GO:0008033; P:GO:0018108; F:GO:0003723; F:GO:0004715; C:GO:0005739; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:peptidyl-tyrosine phosphorylation; F:RNA binding; F:non-membrane spanning protein tyrosine kinase activity; C:mitochondrion; C:chloroplast | Non-specific protein-tyrosine kinase | P:mRNA processing; C:chloroplast | view details | ||
| GU594243.1 | Solanum nigrum | ubiquitin-60S ribosomal protein L40 | 397 | P:GO:0006412; P:GO:0009751; P:GO:0016567; P:GO:0019941; F:GO:0003729; F:GO:0003735; F:GO:0031386; F:GO:0031625; C:GO:0005634; C:GO:0005840; C:GO:0009536 | P:translation; P:response to salicylic acid; P:protein ubiquitination; P:modification-dependent protein catabolic process; F:mRNA binding; F:structural constituent of ribosome; F:protein tag; F:ubiquitin protein ligase binding; C:nucleus; C:ribosome; C:plastid | P:translation; F:structural constituent of ribosome; F:protein binding; C:ribosome | view details | |||
| GU594267.1 | Solanum nigrum | 316 | F:manganese ion binding | view details | ||||||
| KR734694.1 | Solanum nigrum | 670 | P:mRNA processing; C:chloroplast | view details | ||||||
| KR734375.1 | Solanum nigrum | maturase K | 618 | P:GO:0006397; P:GO:0008033; F:GO:0003723; C:GO:0009507 | P:mRNA processing; P:tRNA processing; F:RNA binding; C:chloroplast | P:mRNA processing; C:chloroplast | view details | |||
| MG251266.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 758 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| JQ815389.1 | Solanum nigrum | Kunitz-type protease inhibitor precursor | 570 | P:GO:0010951; F:GO:0004867; F:GO:0019828; C:GO:0005773 | P:negative regulation of endopeptidase activity; F:serine-type endopeptidase inhibitor activity; F:aspartic-type endopeptidase inhibitor activity; C:vacuole | F:endopeptidase inhibitor activity | view details | |||
| GU575297.1 | Solanum nigrum | ABC transporter family protein | 300 | P:GO:0006897; C:GO:0030125 | P:endocytosis; C:clathrin vesicle coat | P:endocytosis; C:membrane | view details | |||
| GU575335.1 | Solanum nigrum | cationic peroxidase 1-like | 312 | P:GO:0006979; P:GO:0042744; P:GO:0098869; F:GO:0004601; F:GO:0020037; F:GO:0046872; C:GO:0005576 | P:response to oxidative stress; P:hydrogen peroxide catabolic process; P:cellular oxidant detoxification; F:peroxidase activity; F:heme binding; F:metal ion binding; C:extracellular region | Acting on a peroxide as acceptor | P:response to oxidative stress; F:peroxidase activity; F:heme binding | view details | ||
| MK285280.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 554 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| HQ853436.1 | Solanum nigrum | MADS box transcription factor | 612 | P:GO:0045944; F:GO:0000978; F:GO:0000981; F:GO:0046983; C:GO:0005634 | P:positive regulation of transcription by RNA polymerase II; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; F:DNA-binding transcription factor activity, RNA polymerase II-specific; F:protein dimerization activity; C:nucleus | P:regulation of transcription, DNA-templated; F:DNA binding; F:DNA-binding transcription factor activity; F:protein dimerization activity; C:nucleus | view details | |||
| GU594258.1 | Solanum nigrum | putative aldo-keto reductase 2 | 767 | F:GO:0004033; C:GO:0005737 | F:aldo-keto reductase (NADP) activity; C:cytoplasm | Acting on the CH-OH group of donors | no GO terms | view details | ||
| GU575360.1 | Solanum nigrum | BES1/BZR1 homolog protein 4-like isoform X1 | 555 | P:GO:0006355; P:GO:0009742; F:GO:0003700 | P:regulation of transcription, DNA-templated; P:brassinosteroid mediated signaling pathway; F:DNA-binding transcription factor activity | P:transcription, DNA-templated; P:brassinosteroid mediated signaling pathway; F:DNA-binding transcription factor activity | view details | |||
| MH311570.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 601 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| MK285279.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 578 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| GU575340.1 | Solanum nigrum | serine/threonine-protein kinase SRK2I-like | 727 | P:GO:0006468; P:GO:0035556; F:GO:0004674; F:GO:0005524; C:GO:0005634 | P:protein phosphorylation; P:intracellular signal transduction; F:protein serine/threonine kinase activity; F:ATP binding; C:nucleus | Transferring phosphorus-containing groups | P:protein phosphorylation; F:protein kinase activity; F:ATP binding | view details | ||
| MH265199.1 | Solanum nigrum | maturase K | 888 | P:GO:0006397; P:GO:0008033; P:GO:0008380; F:GO:0003723; C:GO:0005840; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:RNA splicing; F:RNA binding; C:ribosome; C:chloroplast | P:mRNA processing; C:chloroplast | view details | |||
| MH285780.1 | Solanum nigrum | maturase K | 839 | P:GO:0006397; P:GO:0008033; P:GO:0008380; P:GO:0018108; F:GO:0003723; F:GO:0004715; C:GO:0005840; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:RNA splicing; P:peptidyl-tyrosine phosphorylation; F:RNA binding; F:non-membrane spanning protein tyrosine kinase activity; C:ribosome; C:chloroplast | Non-specific protein-tyrosine kinase | P:mRNA processing; C:chloroplast | view details | ||
| JN895462.1 | Solanum nigrum | maturase K | 700 | P:GO:0006397; P:GO:0008033; P:GO:0018108; F:GO:0003723; F:GO:0004715; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:peptidyl-tyrosine phosphorylation; F:RNA binding; F:non-membrane spanning protein tyrosine kinase activity; C:chloroplast | Non-specific protein-tyrosine kinase | P:mRNA processing; C:chloroplast | view details | ||
| GQ435723.1 | Solanum nigrum | cytochrome c heme attachment protein | 368 | P:GO:0017004; F:GO:0020037; C:GO:0009507; C:GO:0016021 | P:cytochrome complex assembly; F:heme binding; C:chloroplast; C:integral component of membrane | P:cytochrome complex assembly; F:heme binding | view details | |||
| MH551264.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 445 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| GU575319.1 | Solanum nigrum | osmotin-like protein | 270 | P:GO:0006952; P:GO:0009607 | P:defense response; P:response to biotic stimulus | no GO terms | view details | |||
| AF283464.1 | Solanum nigrum | aspartic protease inhibitor 5 | 546 | P:GO:0010951; F:GO:0004867; F:GO:0008233; F:GO:0019828; C:GO:0005773 | P:negative regulation of endopeptidase activity; F:serine-type endopeptidase inhibitor activity; F:peptidase activity; F:aspartic-type endopeptidase inhibitor activity; C:vacuole | Acting on peptide bonds (peptidases) | F:endopeptidase inhibitor activity | view details | ||
| JF956496.1 | Solanum nigrum | maturase K | 726 | P:GO:0006397; P:GO:0008033; F:GO:0003723; C:GO:0005739; C:GO:0009507 | P:mRNA processing; P:tRNA processing; F:RNA binding; C:mitochondrion; C:chloroplast | P:mRNA processing; C:chloroplast | view details | |||
| GU575316.1 | Solanum nigrum | auxin response factor 6-like isoform X1 | 426 | P:GO:0006355; P:GO:0009734; F:GO:0003677; C:GO:0005634 | P:regulation of transcription, DNA-templated; P:auxin-activated signaling pathway; F:DNA binding; C:nucleus | P:regulation of transcription, DNA-templated; P:response to hormone; F:DNA binding | view details | |||
| GE650049.1 | Solanum nigrum | glutamine synthetase | 167 | P:GO:0006542; P:GO:0009399; F:GO:0004356; F:GO:0005524; C:GO:0005737 | P:glutamine biosynthetic process; P:nitrogen fixation; F:glutamate-ammonia ligase activity; F:ATP binding; C:cytoplasm | Glutamine synthetase | P:nitrogen compound metabolic process; F:catalytic activity; F:glutamate-ammonia ligase activity | view details | ||
| EU677015.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 617 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| HM850367.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 1363 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| KP265011.1 | Solanum nigrum | lycopene beta cyclase, chloroplastic | 203 | P:GO:0006744; P:GO:0016120; P:GO:0016123; F:GO:0016705; F:GO:0045436; C:GO:0009507; C:GO:0009509 | P:ubiquinone biosynthetic process; P:carotene biosynthetic process; P:xanthophyll biosynthetic process; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; F:lycopene beta cyclase activity; C:chloroplast; C:chromoplast | Acting on paired donors, with incorporation or reduction of molecular oxygen. The oxygen incorporated need not be derived from O(2); Intramolecular oxidoreductases | no GO terms | view details | ||
| JN891548.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 505 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| MH360739.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 1536 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| MH588529.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 643 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| JN892749.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 542 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| EU262259.1 | Solanum nigrum | leucine aminopeptidase 2, chloroplastic | 934 | P:GO:0006508; F:GO:0000287; F:GO:0030145; F:GO:0070006; C:GO:0009507 | P:proteolysis; F:magnesium ion binding; F:manganese ion binding; F:metalloaminopeptidase activity; C:chloroplast | Acting on peptide bonds (peptidases) | P:proteolysis; P:protein metabolic process; F:manganese ion binding; F:metalloaminopeptidase activity; C:cytoplasm | view details | ||
| MH092639.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 529 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| GU594259.1 | Solanum nigrum | chaperone protein dnaJ 10-like | 195 | no GO terms | view details | |||||
| GU575327.1 | Solanum nigrum | probable WRKY transcription factor 50 | 280 | P:GO:0006355; P:GO:0009867; P:GO:0050832; F:GO:0003700; F:GO:0043565; C:GO:0005634 | P:regulation of transcription, DNA-templated; P:jasmonic acid mediated signaling pathway; P:defense response to fungus; F:DNA-binding transcription factor activity; F:sequence-specific DNA binding; C:nucleus | P:regulation of transcription, DNA-templated; F:DNA-binding transcription factor activity; F:sequence-specific DNA binding | view details | |||
| AX324315.1 | Solanum nigrum | D1 | 121 | P:GO:0009772; P:GO:0018298; F:GO:0016168; F:GO:0045156; F:GO:0046872; C:GO:0009507; C:GO:0009523; C:GO:0016021; C:GO:0031676; C:GO:0042170 | P:photosynthetic electron transport in photosystem II; P:protein-chromophore linkage; F:chlorophyll binding; F:electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; F:metal ion binding; C:chloroplast; C:photosystem II; C:integral component of membrane; C:plasma membrane-derived thylakoid membrane; C:plastid membrane | Oxidoreductases | P:photosynthetic electron transport in photosystem II; P:photosynthesis, light reaction; F:electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | view details | ||
| GU594275.1 | Solanum nigrum | 36.4 kDa proline-rich protein-like | 270 | no GO terms | view details | |||||
| MH588530.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 701 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| GU575347.1 | Solanum nigrum | ubiquitin-like domain-containing CTD phosphatase | 608 | P:GO:0006470; F:GO:0017018; C:GO:0005634 | P:protein dephosphorylation; F:myosin phosphatase activity; C:nucleus | Protein-serine/threonine phosphatase | F:protein binding | view details | ||
| AY547562.1 | Solanum nigrum | R1 | 1499 | P:GO:0009626; F:GO:0005524; F:GO:0043531; C:GO:0005737; C:GO:0016020 | P:plant-type hypersensitive response; F:ATP binding; F:ADP binding; C:cytoplasm; C:membrane | no GO terms | view details | |||
| GU594251.1 | Solanum nigrum | Peroxidase N | 304 | P:GO:0006979; P:GO:0042744; P:GO:0098869; F:GO:0004601; F:GO:0020037; F:GO:0046872; C:GO:0005576 | P:response to oxidative stress; P:hydrogen peroxide catabolic process; P:cellular oxidant detoxification; F:peroxidase activity; F:heme binding; F:metal ion binding; C:extracellular region | Acting on a peroxide as acceptor | P:response to oxidative stress; F:peroxidase activity; F:heme binding | view details | ||
| MH085984.1 | Solanum nigrum | maturase K | 845 | P:GO:0006397; P:GO:0008033; P:GO:0008380; P:GO:0018108; F:GO:0003723; F:GO:0004715; C:GO:0005840; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:RNA splicing; P:peptidyl-tyrosine phosphorylation; F:RNA binding; F:non-membrane spanning protein tyrosine kinase activity; C:ribosome; C:chloroplast | Non-specific protein-tyrosine kinase | P:mRNA processing; C:chloroplast | view details | ||
| GU575313.1 | Solanum nigrum | catalase | 495 | P:GO:0042542; P:GO:0042744; P:GO:0098869; F:GO:0004096; F:GO:0020037; F:GO:0046872; C:GO:0005886; C:GO:0009514 | P:response to hydrogen peroxide; P:hydrogen peroxide catabolic process; P:cellular oxidant detoxification; F:catalase activity; F:heme binding; F:metal ion binding; C:plasma membrane; C:glyoxysome | Catalase | P:response to oxidative stress; F:catalase activity; F:heme binding | view details | ||
| KY448290.1 | Solanum nigrum | ABC transporter C family member 12-like isoform X1 | 959 | P:GO:0055085; F:GO:0005524; F:GO:0140359; C:GO:0016021 | P:transmembrane transport; F:ATP binding; F:ABC-type transporter activity; C:integral component of membrane | Translocases | P:transmembrane transport; F:ATP binding; F:ABC-type transporter activity; C:integral component of membrane | view details | ||
| KF454053.1 | Solanum nigrum | Protein TAR1 | 435 | no GO terms | view details | |||||
| KF454055.1 | Solanum nigrum | Protein TAR1 | 435 | no GO terms | view details | |||||
| KF454051.1 | Solanum nigrum | Protein TAR1 | 435 | no GO terms | view details | |||||
| MZ489708.1 | Solanum nigrum | Protein TAR1 | 435 | no GO terms | view details | |||||
| MG730624.1 | Solanum nigrum | Protein TAR1 | 435 | no GO terms | view details | |||||
| GU594269.1 | Solanum nigrum | MIP family channel protein | 252 | P:GO:0055085; F:GO:0015267; C:GO:0016021 | P:transmembrane transport; F:channel activity; C:integral component of membrane | Translocases | P:transmembrane transport; F:channel activity; C:membrane | view details | ||
| MG730621.1 | Solanum nigrum | Protein TAR1 | 435 | no GO terms | view details | |||||
| MN723979.1 | Solanum nigrum | Protein TAR1 | 330 | no GO terms | view details | |||||
| GU594253.1 | Solanum nigrum | ubiquitin fusion degradation protein 1 homolog | 878 | P:GO:0030433; P:GO:0071712; F:GO:0031593; C:GO:0034098 | P:ubiquitin-dependent ERAD pathway; P:ER-associated misfolded protein catabolic process; F:polyubiquitin modification-dependent protein binding; C:VCP-NPL4-UFD1 AAA ATPase complex | P:ubiquitin-dependent protein catabolic process | view details | |||
| MH327778.1 | Solanum nigrum | Protein TAR1 | 448 | no GO terms | view details | |||||
| AF421897.1 | Solanum nigrum | Pto disease resistance protein | 1245 | P:GO:0018108; P:GO:0046777; F:GO:0004674; F:GO:0004714; F:GO:0005515; F:GO:0005524; C:GO:0005886 | P:peptidyl-tyrosine phosphorylation; P:protein autophosphorylation; F:protein serine/threonine kinase activity; F:transmembrane receptor protein tyrosine kinase activity; F:protein binding; F:ATP binding; C:plasma membrane | Receptor protein-tyrosine kinase | P:protein phosphorylation; F:protein kinase activity; F:transmembrane receptor protein tyrosine kinase activity; F:ATP binding | view details | ||
| GU575350.1 | Solanum nigrum | membrane-anchored ubiquitin-fold protein 3-like | 323 | C:GO:0005886 | C:plasma membrane | F:protein binding | view details | |||
| MG730622.1 | Solanum nigrum | Protein TAR1 | 435 | no GO terms | view details | |||||
| GE745610.1 | Solanum nigrum | gamma-glutamyltransferase | 195 | P:GO:0006508; P:GO:0006750; P:GO:0006751; F:GO:0036374; F:GO:0102953; F:GO:0103068 | P:proteolysis; P:glutathione biosynthetic process; P:glutathione catabolic process; F:glutathione hydrolase activity; F:hypoglycin A gamma-glutamyl transpeptidase activity; F:leukotriene C4 gamma-glutamyl transferase activity | Gamma-glutamyltransferase; Glutathione gamma-glutamate hydrolase | no GO terms | view details | ||
| KX166238.1 | Solanum nigrum | Protein TAR1 | 435 | no IPS match | view details | |||||
| Z71250.1 | Solanum nigrum | ribosomal protein S19 | 294 | P:GO:0000028; P:GO:0006412; F:GO:0003735; F:GO:0019843; C:GO:0005763; C:GO:0009507 | P:ribosomal small subunit assembly; P:translation; F:structural constituent of ribosome; F:rRNA binding; C:mitochondrial small ribosomal subunit; C:chloroplast | no IPS match | view details | |||
| MG219034.1 | Solanum nigrum | Regulator of rDNA transcription protein 15 | 331 | no GO terms | view details | |||||
| MG730625.1 | Solanum nigrum | Protein TAR1 | 435 | no GO terms | view details | |||||
| KU233684.1 | Solanum nigrum | Ubiquitin-conjugating enzyme E2 32 | 919 | P:GO:0000209; P:GO:0006511; F:GO:0061631; C:GO:0005634; C:GO:0016021 | P:protein polyubiquitination; P:ubiquitin-dependent protein catabolic process; F:ubiquitin conjugating enzyme activity; C:nucleus; C:integral component of membrane | E2 ubiquitin-conjugating enzyme | no GO terms | view details | ||
| GU575320.1 | Solanum nigrum | NAC domain-containing protein 2-like | 403 | P:GO:0006355; F:GO:0003677 | P:regulation of transcription, DNA-templated; F:DNA binding | no GO terms | view details | |||
| KX166237.1 | Solanum nigrum | Protein TAR1 | 435 | no GO terms | view details | |||||
| KY652843.1 | Solanum nigrum | Protein TAR1 | 454 | no IPS match | view details | |||||
| KF454058.1 | Solanum nigrum | Protein TAR1 | 435 | no GO terms | view details | |||||
| KF454052.1 | Solanum nigrum | Protein TAR1 | 435 | no GO terms | view details | |||||
| KF454056.1 | Solanum nigrum | Protein TAR1 | 435 | no GO terms | view details | |||||
| KF454050.1 | Solanum nigrum | Protein TAR1 | 435 | no GO terms | view details | |||||
| MG730623.1 | Solanum nigrum | Protein TAR1 | 435 | no GO terms | view details | |||||
| KF454049.1 | Solanum nigrum | Protein TAR1 | 435 | no GO terms | view details | |||||
| MG256315.1 | Solanum nigrum | Regulator of rDNA transcription protein 15 | 331 | no IPS match | view details | |||||
| GU575349.1 | Solanum nigrum | Ubiquitin-conjugating enzyme E2 2 | 191 | P:GO:0000209; P:GO:0006281; P:GO:0016574; P:GO:0043161; F:GO:0005524; F:GO:0061631; C:GO:0016021 | P:protein polyubiquitination; P:DNA repair; P:histone ubiquitination; P:proteasome-mediated ubiquitin-dependent protein catabolic process; F:ATP binding; F:ubiquitin conjugating enzyme activity; C:integral component of membrane | E2 ubiquitin-conjugating enzyme | no GO terms | view details | ||
| KF454057.1 | Solanum nigrum | Protein TAR1 | 435 | no GO terms | view details | |||||
| MG217917.1 | Solanum nigrum | Regulator of rDNA transcription protein 15 | 331 | no GO terms | view details | |||||
| GU594263.1 | Solanum nigrum | probable E3 ubiquitin-protein ligase XERICO | 471 | F:GO:0016874; C:GO:0016021 | F:ligase activity; C:integral component of membrane | Ligases | no GO terms | view details | ||
| KF442266.1 | Solanum nigrum | aminodeoxychorismate synthase, chloroplastic | 3151 | P:GO:0006541; P:GO:0008153; P:GO:0046654; P:GO:0046656; F:GO:0046820; C:GO:0009507 | P:glutamine metabolic process; P:para-aminobenzoic acid biosynthetic process; P:tetrahydrofolate biosynthetic process; P:folic acid biosynthetic process; F:4-amino-4-deoxychorismate synthase activity; C:chloroplast | Aminodeoxychorismate synthase | P:biosynthetic process; P:folic acid-containing compound biosynthetic process | view details | ||
| DQ222318.1 | Solanum nigrum | osmotin-like protein | 910 | P:GO:0031640; P:GO:0050832 | P:killing of cells of other organism; P:defense response to fungus | no GO terms | view details | |||
| KF442264.1 | Solanum nigrum | probable protein phosphatase 2C 24 | 1628 | P:GO:0006470; F:GO:0017018; F:GO:0046872; C:GO:0005634; C:GO:0005829 | P:protein dephosphorylation; F:myosin phosphatase activity; F:metal ion binding; C:nucleus; C:cytosol | Protein-serine/threonine phosphatase | F:protein serine/threonine phosphatase activity | view details | ||
| KF442268.1 | Solanum nigrum | ABSCISIC ACID-INSENSITIVE 5-like protein 7 | 1759 | P:GO:0045893; F:GO:0003700; C:GO:0005634 | P:positive regulation of transcription, DNA-templated; F:DNA-binding transcription factor activity; C:nucleus | P:regulation of transcription, DNA-templated; P:positive regulation of transcription, DNA-templated; F:DNA-binding transcription factor activity | view details | |||
| U25659.1 | Solanum nigrum | photosystem II protein D1 | 1384 | P:GO:0009635; P:GO:0009772; P:GO:0018298; F:GO:0005506; F:GO:0010242; F:GO:0016168; F:GO:0016682; F:GO:0045156; C:GO:0009523; C:GO:0009535; C:GO:0016021 | P:response to herbicide; P:photosynthetic electron transport in photosystem II; P:protein-chromophore linkage; F:iron ion binding; F:oxygen evolving activity; F:chlorophyll binding; F:oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor; F:electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; C:photosystem II; C:chloroplast thylakoid membrane; C:integral component of membrane | Photosystem II | P:photosynthetic electron transport in photosystem II; P:photosynthesis, light reaction; F:electron transfer activity; F:electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | view details | ||
| KF442271.1 | Solanum nigrum | abscisic-aldehyde oxidase-like | 5464 | P:GO:0006124; P:GO:0022900; F:GO:0005506; F:GO:0009055; F:GO:0051537; F:GO:0071949; C:GO:0009507 | P:ferredoxin metabolic process; P:electron transport chain; F:iron ion binding; F:electron transfer activity; F:2 iron, 2 sulfur cluster binding; F:FAD binding; C:chloroplast | Oxidoreductases | F:iron ion binding; F:oxidoreductase activity; F:metal ion binding; F:flavin adenine dinucleotide binding; F:iron-sulfur cluster binding; F:FAD binding | view details | ||
| Y18934.1 | Solanum nigrum | NdhB | 7829 | C:GO:0009507; C:GO:0009579; C:GO:0016021 | C:chloroplast; C:thylakoid; C:integral component of membrane | no GO terms | view details | |||
| KF442263.1 | Solanum nigrum | protein ABA DEFICIENT 4, chloroplastic | 1131 | C:GO:0016021 | C:integral component of membrane | no GO terms | view details | |||
| FJ402836.2 | Solanum nigrum | superoxide dismutase [Fe], chloroplastic isoform X2 | 750 | P:GO:0019430; F:GO:0004784; F:GO:0046872; C:GO:0042644 | P:removal of superoxide radicals; F:superoxide dismutase activity; F:metal ion binding; C:chloroplast nucleoid | Superoxide dismutase | P:superoxide metabolic process; F:superoxide dismutase activity; F:metal ion binding | view details | ||
| FJ402838.1 | Solanum nigrum | catalase | 1202 | P:GO:0042542; P:GO:0042744; P:GO:0098869; F:GO:0004096; F:GO:0020037; F:GO:0046872; C:GO:0005886; C:GO:0009514 | P:response to hydrogen peroxide; P:hydrogen peroxide catabolic process; P:cellular oxidant detoxification; F:catalase activity; F:heme binding; F:metal ion binding; C:plasma membrane; C:glyoxysome | Catalase | P:response to oxidative stress; F:catalase activity; F:heme binding | view details | ||
| FJ979918.1 | Solanum nigrum | L-ascorbate peroxidase 1, cytosolic | 710 | P:GO:0000302; P:GO:0034599; P:GO:0042744; P:GO:0098869; F:GO:0016688; F:GO:0020037; F:GO:0046872; C:GO:0009507 | P:response to reactive oxygen species; P:cellular response to oxidative stress; P:hydrogen peroxide catabolic process; P:cellular oxidant detoxification; F:L-ascorbate peroxidase activity; F:heme binding; F:metal ion binding; C:chloroplast | L-ascorbate peroxidase | P:response to oxidative stress; P:cellular response to oxidative stress; F:peroxidase activity; F:heme binding | view details | ||
| GU133372.1 | Solanum nigrum | trypsin proteinase inhibitor precursor | 624 | P:GO:0010951; F:GO:0004867 | P:negative regulation of endopeptidase activity; F:serine-type endopeptidase inhibitor activity | F:serine-type endopeptidase inhibitor activity | view details | |||
| FJ402837.1 | Solanum nigrum | catalase isozyme 1 | 769 | P:GO:0009820; P:GO:0042542; P:GO:0042744; P:GO:0098869; F:GO:0004096; F:GO:0020037; F:GO:0046872; C:GO:0005777; C:GO:0005886 | P:alkaloid metabolic process; P:response to hydrogen peroxide; P:hydrogen peroxide catabolic process; P:cellular oxidant detoxification; F:catalase activity; F:heme binding; F:metal ion binding; C:peroxisome; C:plasma membrane | Catalase | P:response to oxidative stress; F:catalase activity; F:heme binding | view details | ||
| NC_028070.2 | Solanum nigrum | 155432 | F:ATP binding; F:ATPase | view details | ||||||
| GU133370.1 | Solanum nigrum | proteinase inhibitor II | 613 | P:GO:0010951; F:GO:0004867; F:GO:0008233; C:GO:0005576; C:GO:0016020 | P:negative regulation of endopeptidase activity; F:serine-type endopeptidase inhibitor activity; F:peptidase activity; C:extracellular region; C:membrane | Acting on peptide bonds (peptidases) | no IPS match | view details | ||
| KP411747.1 | Solanum nigrum | metal-nicotianamine transporter YSL2-like isoform X1 | 3729 | P:GO:0010039; P:GO:0033214; P:GO:0035672; P:GO:0048316; F:GO:0035673; F:GO:0051980; C:GO:0005886; C:GO:0016021 | P:response to iron ion; P:siderophore-dependent iron import into cell; P:oligopeptide transmembrane transport; P:seed development; F:oligopeptide transmembrane transporter activity; F:iron-nicotianamine transmembrane transporter activity; C:plasma membrane; C:integral component of membrane | Translocases | F:oligopeptide transmembrane transporter activity | view details | ||
| FJ402839.1 | Solanum nigrum | chlorophyll a-b binding protein 1C, chloroplastic | 845 | P:GO:0009416; P:GO:0009768; P:GO:0018298; F:GO:0016168; F:GO:0046872; C:GO:0009522; C:GO:0009523; C:GO:0009535; C:GO:0016021 | P:response to light stimulus; P:photosynthesis, light harvesting in photosystem I; P:protein-chromophore linkage; F:chlorophyll binding; F:metal ion binding; C:photosystem I; C:photosystem II; C:chloroplast thylakoid membrane; C:integral component of membrane | P:photosynthesis, light harvesting; C:membrane | view details | |||
| FJ979919.1 | Solanum nigrum | L-ascorbate peroxidase 3, peroxisomal | 970 | P:GO:0000302; P:GO:0034599; P:GO:0042744; P:GO:0098869; F:GO:0008289; F:GO:0016688; F:GO:0020037; F:GO:0046872; C:GO:0005777; C:GO:0009507; C:GO:0016021 | P:response to reactive oxygen species; P:cellular response to oxidative stress; P:hydrogen peroxide catabolic process; P:cellular oxidant detoxification; F:lipid binding; F:L-ascorbate peroxidase activity; F:heme binding; F:metal ion binding; C:peroxisome; C:chloroplast; C:integral component of membrane | L-ascorbate peroxidase | P:response to oxidative stress; P:cellular response to oxidative stress; F:peroxidase activity; F:heme binding | view details | ||
| AY422686.1 | Solanum nigrum | proteinase inhibitor II | 687 | P:GO:0010951; F:GO:0004867 | P:negative regulation of endopeptidase activity; F:serine-type endopeptidase inhibitor activity | F:serine-type endopeptidase inhibitor activity | view details | |||
| EU482410.2 | Solanum nigrum | Hydroxyproline-rich systemin | 797 | P:GO:0006952; F:GO:0005102 | P:defense response; F:signaling receptor binding | no GO terms | view details | |||
| KF442265.1 | Solanum nigrum | abscisic acid receptor PYL9-like | 996 | P:GO:0009738; P:GO:0043086; P:GO:0080163; F:GO:0004864; F:GO:0010427; F:GO:0038023; C:GO:0005634; C:GO:0005737; C:GO:0005886 | P:abscisic acid-activated signaling pathway; P:negative regulation of catalytic activity; P:regulation of protein serine/threonine phosphatase activity; F:protein phosphatase inhibitor activity; F:abscisic acid binding; F:signaling receptor activity; C:nucleus; C:cytoplasm; C:plasma membrane | no GO terms | view details | |||
| KF442269.1 | Solanum nigrum | ABSCISIC ACID-INSENSITIVE 5-like protein 5 | 2249 | P:GO:0045893; F:GO:0003700; C:GO:0005634 | P:positive regulation of transcription, DNA-templated; F:DNA-binding transcription factor activity; C:nucleus | P:regulation of transcription, DNA-templated; P:positive regulation of transcription, DNA-templated; F:DNA-binding transcription factor activity | view details | |||
| GU133371.1 | Solanum nigrum | proteinase inhibitor II | 518 | P:GO:0010951; F:GO:0004867; F:GO:0008233; C:GO:0005576 | P:negative regulation of endopeptidase activity; F:serine-type endopeptidase inhibitor activity; F:peptidase activity; C:extracellular region | Acting on peptide bonds (peptidases) | F:serine-type endopeptidase inhibitor activity | view details | ||
| AF000375.1 | Solanum nigrum | prosystemin | 689 | P:GO:0007165; F:GO:0005179; C:GO:0005737 | P:signal transduction; F:hormone activity; C:cytoplasm | no GO terms | view details | |||
| KF442270.1 | Solanum nigrum | putative HVA22-like protein g | 1393 | C:GO:0016020 | C:membrane | no GO terms | view details | |||
| X01651.1 | Solanum nigrum | photosystem II protein D1 | 1501 | P:GO:0009635; P:GO:0009772; P:GO:0018298; F:GO:0005506; F:GO:0010242; F:GO:0016168; F:GO:0016682; F:GO:0045156; C:GO:0009523; C:GO:0009535; C:GO:0016021 | P:response to herbicide; P:photosynthetic electron transport in photosystem II; P:protein-chromophore linkage; F:iron ion binding; F:oxygen evolving activity; F:chlorophyll binding; F:oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor; F:electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; C:photosystem II; C:chloroplast thylakoid membrane; C:integral component of membrane | Photosystem II | P:photosynthetic electron transport in photosystem II; P:photosynthesis, light reaction; F:electron transfer activity; F:electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | view details | ||
| KM489055.2 | Solanum nigrum | 155432 | F:ATP binding; F:ATPase | view details | ||||||
| KT375308.1 | Solanum nigrum | 154671 | F:ATP binding; F:ATPase | view details | ||||||
| KF442272.1 | Solanum nigrum | ninja-family protein AFP3 | 2170 | P:GO:0007165; P:GO:0009737; P:GO:0045892; C:GO:0005634; C:GO:0016021 | P:signal transduction; P:response to abscisic acid; P:negative regulation of transcription, DNA-templated; C:nucleus; C:integral component of membrane | P:signal transduction | view details | |||
| KF442267.1 | Solanum nigrum | carotenoid 9,10(9,10)-cleavage dioxygenase 1-like isoform X1 | 2049 | P:GO:0016121; F:GO:0010436; F:GO:0046872; C:GO:0009570 | P:carotene catabolic process; F:carotenoid dioxygenase activity; F:metal ion binding; C:chloroplast stroma | Acting on single donors with incorporation of molecular oxygen (oxygenases). The oxygen incorporated need not be derived from O(2) | F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | view details | ||
| GE650048.1 | Solanum nigrum | orfB protein | 469 | P:GO:0006351; F:GO:0003677; F:GO:0003899; C:GO:0000428; C:GO:0005739 | P:transcription, DNA-templated; F:DNA binding; F:DNA-directed 5-3 RNA polymerase activity; C:DNA-directed RNA polymerase complex; C:mitochondrion | DNA-directed RNA polymerase | no IPS match | view details | ||
| MA032184.1 | Solanum nigrum | trans-cinnamate 4-monooxygenase | 1518 | F:GO:0004497; F:GO:0005506; F:GO:0016705; F:GO:0020037; C:GO:0016021 | F:monooxygenase activity; F:iron ion binding; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; F:heme binding; C:integral component of membrane | Acting on paired donors, with incorporation or reduction of molecular oxygen. The oxygen incorporated need not be derived from O(2) | F:monooxygenase activity; F:iron ion binding; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; F:heme binding | view details | ||
| JE984610.1 | Solanum nigrum | squalene synthase | 1236 | P:GO:0016126; P:GO:0045338; F:GO:0004310; F:GO:0046872; F:GO:0051996; C:GO:0005789; C:GO:0016021 | P:sterol biosynthetic process; P:farnesyl diphosphate metabolic process; F:farnesyl-diphosphate farnesyltransferase activity; F:metal ion binding; F:squalene synthase activity; C:endoplasmic reticulum membrane; C:integral component of membrane | Geranylgeranyl diphosphate synthase; Squalene synthase | P:lipid biosynthetic process; P:biosynthetic process; F:farnesyl-diphosphate farnesyltransferase activity; F:farnesyltranstransferase activity | view details | ||
| KRR737187.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 504 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| MT694774.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 552 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| MA251265.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 758 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| HZ572811.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 677 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| MN156293.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 707 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| MN046291.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 723 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| KZ569178.1 | Solanum nigrum | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 449 | P:GO:0009853; P:GO:0019253; F:GO:0000287; F:GO:0004497; F:GO:0016984; C:GO:0009507 | P:photorespiration; P:reductive pentose-phosphate cycle; F:magnesium ion binding; F:monooxygenase activity; F:ribulose-bisphosphate carboxylase activity; C:chloroplast | Ribulose-bisphosphate carboxylase; Oxidoreductases | P:carbon fixation; F:magnesium ion binding; F:ribulose-bisphosphate carboxylase activity | view details | ||
| KZ245903.1 | Solanum nigrum | phytoene synthase 2, chloroplastic | 457 | P:GO:0016117; F:GO:0004311; F:GO:0016767; C:GO:0009507; C:GO:0016021 | P:carotenoid biosynthetic process; F:farnesyltranstransferase activity; F:geranylgeranyl-diphosphate geranylgeranyltransferase activity; C:chloroplast; C:integral component of membrane | Geranylgeranyl diphosphate synthase; 15-cis-phytoene synthase; (2E,6E)-farnesyl diphosphate synthase | P:biosynthetic process; F:farnesyltranstransferase activity | view details | ||
| KP265012.1 | Solanum nigrum | phenylalanine ammonia-lyase | 352 | P:GO:0006559; P:GO:0009800; F:GO:0045548; C:GO:0005737 | P:L-phenylalanine catabolic process; P:cinnamic acid biosynthetic process; F:phenylalanine ammonia-lyase activity; C:cytoplasm | Phenylalanine ammonia-lyase; Phenylalanine/tyrosine ammonia-lyase | F:catalytic activity | view details | ||
| MT946984.1 | Solanum nigrum | maturase K | 881 | P:GO:0006397; P:GO:0008033; P:GO:0008380; F:GO:0003723; C:GO:0005840; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:RNA splicing; F:RNA binding; C:ribosome; C:chloroplast | P:mRNA processing; C:chloroplast | view details | |||
| JX511978.1 | Solanum nigrum | maturase K | 825 | P:GO:0006397; P:GO:0008033; P:GO:0008380; P:GO:0018108; F:GO:0003723; F:GO:0004715; C:GO:0005739; C:GO:0009507 | P:mRNA processing; P:tRNA processing; P:RNA splicing; P:peptidyl-tyrosine phosphorylation; F:RNA binding; F:non-membrane spanning protein tyrosine kinase activity; C:mitochondrion; C:chloroplast | Non-specific protein-tyrosine kinase | P:mRNA processing; C:chloroplast | view details | ||
| GE575330.1 | Solanum nigrum | glutathione S-transferase zeta class-like | 290 | P:GO:0006559; P:GO:0006749; F:GO:0004364; F:GO:0016034; C:GO:0005737 | P:L-phenylalanine catabolic process; P:glutathione metabolic process; F:glutathione transferase activity; F:maleylacetoacetate isomerase activity; C:cytoplasm | Glutathione transferase; Maleylacetoacetate isomerase | no GO terms | view details | ||
| GU575304.1 | Solanum nigrum | delta(24)-sterol reductase-like | 377 | P:GO:0008202; F:GO:0050614; F:GO:0071949; C:GO:0005737; C:GO:0016021 | P:steroid metabolic process; F:delta24-sterol reductase activity; F:FAD binding; C:cytoplasm; C:integral component of membrane | Delta(24)-sterol reductase | no GO terms | view details | ||
| GT575331.1 | Solanum nigrum | catalase isozyme 1 | 547 | P:GO:0042542; P:GO:0042744; P:GO:0098869; F:GO:0004096; F:GO:0020037; F:GO:0046872; C:GO:0005886; C:GO:0009514 | P:response to hydrogen peroxide; P:hydrogen peroxide catabolic process; P:cellular oxidant detoxification; F:catalase activity; F:heme binding; F:metal ion binding; C:plasma membrane; C:glyoxysome | Catalase | P:response to oxidative stress; F:catalase activity; F:heme binding | view details | ||
| GE650047.1 | Solanum nigrum | catalase | 191 | P:GO:0042542; P:GO:0042744; P:GO:0098869; F:GO:0004096; F:GO:0020037; F:GO:0046872; C:GO:0005886; C:GO:0009514 | P:response to hydrogen peroxide; P:hydrogen peroxide catabolic process; P:cellular oxidant detoxification; F:catalase activity; F:heme binding; F:metal ion binding; C:plasma membrane; C:glyoxysome | Catalase | no IPS match | view details | ||
| GA575307.1 | Solanum nigrum | 2-hydroxyisoflavanone dehydratase | 409 | F:GO:0016787 | F:hydrolase activity | Hydrolases | F:hydrolase activity | view details | ||
| GC575332.1 | Solanum nigrum | Catalase | 73 | P:GO:0006979; P:GO:0042744; P:GO:0098869; F:GO:0004096; F:GO:0020037; F:GO:0046872; C:GO:0005777 | P:response to oxidative stress; P:hydrogen peroxide catabolic process; P:cellular oxidant detoxification; F:catalase activity; F:heme binding; F:metal ion binding; C:peroxisome | Catalase | no IPS match | view details | ||
| AF473702.2 | Solanum nigrum | 744 | no GO terms | view details |
lncRNA Information
Gene Information
| Gene ID | Species Name | Symbol | Aliases | Description | Start position | End position | Orientation | Genomic Context |
|---|---|---|---|---|---|---|---|---|
| 26047316 | Solanum nigrum | psbA | APY50_gp086 | PsbA | 565 | 1626 | minus | |
| 26047431 | Solanum nigrum | rps7 | APY50_gp006 | ribosomal protein S7 | 142128 | 142595 | plus | |
| 26047406 | Solanum nigrum | rps7 | APY50_gp020 | ribosomal protein S7 | 98648 | 99115 | minus | |
| 26047439 | Solanum nigrum | rpl2 | APY50_gp001 | ribosomal protein L2 | 153825 | 155315 | plus | |
| 26047438 | Solanum nigrum | rps12 | APY50_gp042 | ribosomal protein S12 | 71599 | 71712 | minus | |
| 26047438 | Solanum nigrum | rps12 | APY50_gp042 | ribosomal protein S12 | 99169 | 99962 | minus | |
| 26047437 | Solanum nigrum | rpl23 | APY50_gp002 | ribosomal protein L23 | 153525 | 153806 | plus | |
| 26047435 | Solanum nigrum | ycf2 | APY50_gp003 | Ycf2 | 146335 | 153177 | minus | |
| 26047434 | Solanum nigrum | ycf15 | APY50_gp004 | Ycf15 | 145987 | 146250 | minus | |
| 26047432 | Solanum nigrum | ndhB | APY50_gp005 | NdhB | 142882 | 145093 | plus | |
| 26047425 | Solanum nigrum | ycf1 | APY50_gp007 | Ycf1 | 125283 | 130943 | minus | |
| 26047424 | Solanum nigrum | rps15 | APY50_gp008 | ribosomal protein S15 | 124604 | 124867 | minus | |
| 26047423 | Solanum nigrum | ndhH | APY50_gp009 | NdhH | 123306 | 124487 | minus | |
| 26047422 | Solanum nigrum | ndhA | APY50_gp010 | NdhA | 121044 | 123304 | minus | |
| 26047421 | Solanum nigrum | ndhI | APY50_gp011 | NdhI | 120456 | 120959 | minus | |
| 26047420 | Solanum nigrum | ndhG | APY50_gp012 | NdhG | 119527 | 120057 | minus | |
| 26047419 | Solanum nigrum | ndhE | APY50_gp013 | NdhE | 118998 | 119303 | minus | |
| 26047418 | Solanum nigrum | psaC | APY50_gp014 | PsaC | 118501 | 118746 | minus | |
| 26047417 | Solanum nigrum | ndhD | APY50_gp015 | NdhD | 116884 | 118383 | minus | |
| 26047416 | Solanum nigrum | ccsA | APY50_gp016 | CcsA | 115694 | 116635 | plus | |
| 26047414 | Solanum nigrum | rpl32 | APY50_gp017 | ribosomal protein L32 | 114427 | 114594 | plus | |
| 26047413 | Solanum nigrum | ndhF | APY50_gp018 | NdhF | 111420 | 113639 | minus | |
| 26047412 | Solanum nigrum | ycf1 | APY50_gp019 | Ycf1 | 110300 | 111520 | plus | |
| 26047405 | Solanum nigrum | ndhB | APY50_gp021 | NdhB | 96150 | 98361 | minus | |
| 26047403 | Solanum nigrum | ycf15 | APY50_gp022 | Ycf15 | 94993 | 95256 | plus | |
| 26047402 | Solanum nigrum | ycf2 | APY50_gp023 | Ycf2 | 88066 | 94908 | plus | |
| 26047400 | Solanum nigrum | rpl23 | APY50_gp024 | ribosomal protein L23 | 87437 | 87718 | minus | |
| 26047399 | Solanum nigrum | rpl2 | APY50_gp025 | ribosomal protein L2 | 85928 | 87418 | minus | |
| 26047398 | Solanum nigrum | rps19 | APY50_gp026 | ribosomal protein S19 | 85581 | 85859 | minus | |
| 26047397 | Solanum nigrum | rpl22 | APY50_gp027 | ribosomal protein L22 | 85061 | 85528 | minus | |
| 26047396 | Solanum nigrum | rps3 | APY50_gp028 | ribosomal protein S3 | 84420 | 85076 | minus | |
| 26047395 | Solanum nigrum | rpl16 | APY50_gp029 | ribosomal protein L16 | 82850 | 84274 | minus | |
| 26047394 | Solanum nigrum | rpl14 | APY50_gp030 | ribosomal protein L14 | 82356 | 82724 | minus | |
| 26047393 | Solanum nigrum | rps8 | APY50_gp031 | ribosomal protein S8 | 81784 | 82188 | minus | |
| 26047392 | Solanum nigrum | rpl36 | APY50_gp032 | ribosomal protein L36 | 81401 | 81514 | minus | |
| 26047391 | Solanum nigrum | rps11 | APY50_gp033 | ribosomal protein S11 | 80883 | 81299 | minus | |
| 26047390 | Solanum nigrum | rpoA | APY50_gp034 | RpoA | 79804 | 80817 | minus | |
| 26047389 | Solanum nigrum | petD | APY50_gp035 | PetD | 78388 | 79617 | plus | |
| 26047388 | Solanum nigrum | petB | APY50_gp036 | PetB | 76799 | 78193 | plus | |
| 26047387 | Solanum nigrum | psbH | APY50_gp037 | PsbH | 76448 | 76669 | plus | |
| 26047386 | Solanum nigrum | psbN | APY50_gp038 | PsbN | 76205 | 76336 | minus | |
| 26047385 | Solanum nigrum | psbT | APY50_gp039 | PsbT | 76023 | 76127 | plus | |
| 26047384 | Solanum nigrum | psbB | APY50_gp040 | PsbB | 74297 | 75823 | plus | |
| 26047383 | Solanum nigrum | clpP | APY50_gp041 | ClpP | 71845 | 73853 | minus | |
| 26047382 | Solanum nigrum | rpl20 | APY50_gp043 | ribosomal protein L20 | 70400 | 70786 | minus | |
| 26047381 | Solanum nigrum | rps18 | APY50_gp044 | ribosomal protein S18 | 69880 | 70185 | plus | |
| 26047380 | Solanum nigrum | rpl33 | APY50_gp045 | ribosomal protein L33 | 69493 | 69693 | plus | |
| 26047379 | Solanum nigrum | psaJ | APY50_gp046 | PsaJ | 68921 | 69055 | plus | |
| 26047376 | Solanum nigrum | petG | APY50_gp047 | PetG | 67925 | 68038 | plus | |
| 26047375 | Solanum nigrum | petL | APY50_gp048 | PetL | 67646 | 67741 | plus | |
| 26047374 | Solanum nigrum | psbE | APY50_gp049 | PsbE | 66386 | 66637 | minus | |
| 26047373 | Solanum nigrum | psbF | APY50_gp050 | PsbF | 66257 | 66376 | minus | |
| 26047372 | Solanum nigrum | psbL | APY50_gp051 | PsbL | 66118 | 66234 | minus | |
| 26047371 | Solanum nigrum | psbJ | APY50_gp052 | PsbJ | 65871 | 65993 | minus | |
| 26047370 | Solanum nigrum | petA | APY50_gp053 | PetA | 64058 | 65020 | plus | |
| 26047369 | Solanum nigrum | cemA | APY50_gp054 | CemA | 63135 | 63824 | plus | |
| 26047368 | Solanum nigrum | ycf4 | APY50_gp055 | Ycf4 | 61859 | 62413 | plus | |
| 26047367 | Solanum nigrum | psaI | APY50_gp056 | PsaI | 61304 | 61414 | plus | |
| 26047366 | Solanum nigrum | accD | APY50_gp057 | AccD | 59042 | 60565 | plus | |
| 26047365 | Solanum nigrum | rbcL | APY50_gp058 | ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit | 56879 | 58312 | plus | |
| 26047364 | Solanum nigrum | atpB | APY50_gp059 | AtpB | 54565 | 56061 | minus | |
| 26047363 | Solanum nigrum | atpE | APY50_gp060 | AtpE | 54167 | 54568 | minus | |
| 26047359 | Solanum nigrum | ndhC | APY50_gp061 | NdhC | 51581 | 51943 | minus | |
| 26047358 | Solanum nigrum | ndhK | APY50_gp062 | NdhK | 50847 | 51701 | minus | |
| 26047357 | Solanum nigrum | ndhJ | APY50_gp063 | NdhJ | 50265 | 50741 | minus | |
| 26047353 | Solanum nigrum | rps4 | APY50_gp064 | ribosomal protein S4 | 46806 | 47411 | minus | |
| 26047351 | Solanum nigrum | ycf3 | APY50_gp065 | Ycf3 | 43848 | 45838 | minus | |
| 26047350 | Solanum nigrum | psaA | APY50_gp066 | PsaA | 40860 | 43112 | minus | |
| 26047349 | Solanum nigrum | psaB | APY50_gp067 | PsaB | 38630 | 40834 | minus | |
| 26047348 | Solanum nigrum | rps14 | APY50_gp068 | ribosomal protein S14 | 38209 | 38511 | minus | |
| 26047345 | Solanum nigrum | psbZ | APY50_gp069 | PsbZ | 37237 | 37425 | plus | |
| 26047343 | Solanum nigrum | psbC | APY50_gp070 | PsbC | 35162 | 36547 | plus | |
| 26047342 | Solanum nigrum | psbD | APY50_gp071 | PsbD | 34117 | 35178 | plus | |
| 26047336 | Solanum nigrum | psbM | APY50_gp072 | PsbM | 30444 | 30548 | minus | |
| 26047335 | Solanum nigrum | petN | APY50_gp073 | PetN | 29245 | 29334 | plus | |
| 26047333 | Solanum nigrum | rpoB | APY50_gp074 | RpoB | 23978 | 27190 | minus | |
| 26047332 | Solanum nigrum | rpoC1 | APY50_gp075 | RpoC1 | 21171 | 23972 | minus | |
| 26047331 | Solanum nigrum | rpoC2 | APY50_gp076 | RpoC2 | 16852 | 21030 | minus | |
| 26047330 | Solanum nigrum | rps2 | APY50_gp077 | ribosomal protein S2 | 15917 | 16627 | minus | |
| 26047329 | Solanum nigrum | atpI | APY50_gp078 | AtpI | 14937 | 15680 | minus | |
| 26047328 | Solanum nigrum | atpH | APY50_gp079 | AtpH | 13536 | 13781 | minus | |
| 26047327 | Solanum nigrum | atpF | APY50_gp080 | AtpF | 11872 | 13134 | minus | |
| 26047326 | Solanum nigrum | atpA | APY50_gp081 | AtpA | 10294 | 11817 | minus | |
| 26047322 | Solanum nigrum | psbI | APY50_gp082 | PsbI | 8219 | 8329 | plus | |
| 26047321 | Solanum nigrum | psbK | APY50_gp083 | PsbK | 7671 | 7856 | plus | |
| 26047319 | Solanum nigrum | rps16 | APY50_gp084 | ribosomal protein S16 | 5071 | 6192 | minus | |
| 26047318 | Solanum nigrum | matK | APY50_gp085 | maturase K | 2141 | 3661 | minus | |
| 26047445 | Solanum nigrum | APY50_gr002 | APY50_gr002 | rrn23 | 132847 | 135656 | minus | |
| 26047444 | Solanum nigrum | APY50_gr003 | APY50_gr003 | rrn4.5 | 132643 | 132745 | minus | |
| 26047442 | Solanum nigrum | APY50_gr005 | APY50_gr005 | rrn5 | 108857 | 108977 | plus | |
| 26047441 | Solanum nigrum | APY50_gr006 | APY50_gr006 | rrn4.5 | 108498 | 108600 | plus | |
| 26047430 | Solanum nigrum | APY50_gr001 | APY50_gr001 | rrn16 | 137852 | 139341 | minus | |
| 26047428 | Solanum nigrum | APY50_gr004 | APY50_gr004 | rrn5 | 132266 | 132386 | minus | |
| 26047410 | Solanum nigrum | APY50_gr007 | APY50_gr007 | rrn23 | 105587 | 108396 | plus | |
| 26047408 | Solanum nigrum | APY50_gr008 | APY50_gr008 | rrn16 | 101892 | 103381 | plus | |
| 26047447 | Solanum nigrum | trnV-GAC | APY50_gt037 | tRNA-Val | 139579 | 139650 | minus | |
| 26047446 | Solanum nigrum | trnA-UGC | APY50_gt035 | tRNA-Ala | 135810 | 136693 | minus | |
| 26047443 | Solanum nigrum | trnR-ACG | APY50_gt030 | tRNA-Arg | 109245 | 109318 | plus | |
| 26047440 | Solanum nigrum | trnI-GAU | APY50_gt028 | tRNA-Ile | 103692 | 104485 | plus | |
| 26047436 | Solanum nigrum | trnI-CAU | APY50_gt039 | tRNA-Ile | 153286 | 153359 | plus | |
| 26047433 | Solanum nigrum | trnL-CAA | APY50_gt038 | tRNA-Leu | 145633 | 145713 | plus | |
| 26047429 | Solanum nigrum | trnI-GAU | APY50_gt036 | tRNA-Ile | 136758 | 137551 | minus | |
| 26047427 | Solanum nigrum | trnR-ACG | APY50_gt034 | tRNA-Arg | 131925 | 131998 | minus | |
| 26047426 | Solanum nigrum | trnN-GUU | APY50_gt033 | tRNA-Asn | 131272 | 131344 | plus | |
| 26047415 | Solanum nigrum | trnL-UAG | APY50_gt032 | tRNA-Leu | 115511 | 115590 | plus | |
| 26047411 | Solanum nigrum | trnN-GUU | APY50_gt031 | tRNA-Asn | 109899 | 109971 | minus | |
| 26047409 | Solanum nigrum | trnA-UGC | APY50_gt029 | tRNA-Ala | 104550 | 105433 | plus | |
| 26047407 | Solanum nigrum | trnV-GAC | APY50_gt027 | tRNA-Val | 101593 | 101664 | plus | |
| 26047404 | Solanum nigrum | trnL-CAA | APY50_gt026 | tRNA-Leu | 95530 | 95610 | minus | |
| 26047401 | Solanum nigrum | trnI-CAU | APY50_gt025 | tRNA-Ile | 87884 | 87957 | minus | |
| 26047378 | Solanum nigrum | trnP-UGG | APY50_gt024 | tRNA-Pro | 68408 | 68481 | minus | |
| 26047377 | Solanum nigrum | trnW-CCA | APY50_gt023 | tRNA-Trp | 68170 | 68243 | minus | |
| 26047362 | Solanum nigrum | trnT-GGU | APY50_gt022 | tRNA-Thr | 53873 | 53931 | plus | |
| 26047361 | Solanum nigrum | trnM-CAU | APY50_gt021 | tRNA-Met | 53867 | 53939 | plus | |
| 26047360 | Solanum nigrum | trnV-UAC | APY50_gt020 | tRNA-Val | 53032 | 53677 | minus | |
| 26047356 | Solanum nigrum | trnF-GAA | APY50_gt019 | tRNA-Phe | 49532 | 49604 | plus | |
| 26047355 | Solanum nigrum | trnL-UAA | APY50_gt018 | tRNA-Leu | 48548 | 49121 | plus | |
| 26047354 | Solanum nigrum | trnT-UGU | APY50_gt017 | tRNA-Thr | 47779 | 47851 | minus | |
| 26047352 | Solanum nigrum | trnS-GGA | APY50_gt016 | tRNA-Ser | 46380 | 46466 | plus | |
| 26047347 | Solanum nigrum | trnfM-CAU | APY50_gt015 | tRNA-Met | 37987 | 38060 | minus | |
| 26047346 | Solanum nigrum | trnG-GCC | APY50_gt014 | tRNA-Gly | 37704 | 37774 | plus | |
| 26047344 | Solanum nigrum | trnS-UGA | APY50_gt013 | tRNA-Ser | 36781 | 36872 | minus | |
| 26047341 | Solanum nigrum | trnM-CAU | APY50_gt012 | tRNA-Met | 32878 | 32936 | plus | |
| 26047340 | Solanum nigrum | trnT-GGU | APY50_gt011 | tRNA-Thr | 32872 | 32943 | plus | |
| 26047339 | Solanum nigrum | trnE-UUC | APY50_gt010 | tRNA-Glu | 31945 | 32017 | minus | |
| 26047338 | Solanum nigrum | trnY-GUA | APY50_gt009 | tRNA-Tyr | 31802 | 31885 | minus | |
| 26047337 | Solanum nigrum | trnD-GUC | APY50_gt008 | tRNA-Asp | 31620 | 31693 | minus | |
| 26047334 | Solanum nigrum | trnC-GCA | APY50_gt007 | tRNA-Cys | 28502 | 28573 | plus | |
| 26047325 | Solanum nigrum | trnR-UCU | APY50_gt006 | tRNA-Arg | 10097 | 10168 | plus | |
| 26047324 | Solanum nigrum | trnG-UCC | APY50_gt005 | tRNA-Gly | 9156 | 9925 | plus | |
| 26047323 | Solanum nigrum | trnS-GCU | APY50_gt004 | tRNA-Ser | 8452 | 8539 | minus | |
| 26047320 | Solanum nigrum | trnQ-UUG | APY50_gt003 | tRNA-Gln | 7254 | 7325 | minus | |
| 26047317 | Solanum nigrum | trnK-UUU | APY50_gt002 | tRNA-Lys | 1841 | 4405 | minus | |
| 26047315 | Solanum nigrum | trnH-GUG | APY50_gt001 | tRNA-His | 32 | 106 | minus | |
| 842120 | Solanum nigrum | PAP1 | phosphatidic acid phosphatase 1 | production of anthocyanin pigment 1 | 21233555 | 21235292 | minus | |
| 944410 | Solanum nigrum | orf1 | TPCTVgp2 | coat protein | 353 | 1081 | plus | |
| 944409 | Solanum nigrum | ORF C3 | TPCTVgp3 | replication-enhancer protein | 1090 | 1494 | minus | |
| 944408 | Solanum nigrum | ORF C4 | TPCTVgp6 | C4 protein | 2342 | 2599 | minus | |
| 944407 | Solanum nigrum | ORF C1 | TPCTVgp5 | replication-associated protein | 1710 | 2759 | minus | |
| 944405 | Solanum nigrum | ORF C2 | TPCTVgp4 | putative transcription activation protein | 1244 | 1723 | minus | |
| 37619785 | Solanum nigrum | D1T75_gp1 | D1T75_gp1 | precoat protein | 142 | 492 | plus | |
| 37619784 | Solanum nigrum | D1T75_gp6 | D1T75_gp6 | C4 | 2171 | 2467 | minus | |
| 37619783 | Solanum nigrum | D1T75_gp5 | D1T75_gp5 | replication initiator protein | 1530 | 2618 | minus | |
| 37619782 | Solanum nigrum | D1T75_gp4 | D1T75_gp4 | transactivator protein | 1223 | 1630 | minus | |
| 37619781 | Solanum nigrum | D1T75_gp3 | D1T75_gp3 | replication enhancer protein | 1078 | 1482 | minus | |
| 37619780 | Solanum nigrum | D1T75_gp2 | D1T75_gp2 | capsid protein | 302 | 1081 | plus |
miRNA Information
| Acc. No. | Species Name | Sequence length | Total pre-miRNA | Sequence |
|---|---|---|---|---|
| GU575338.1 | Solanum nigrum | 498 | 5 Details |
|
| GU323360.1 | Solanum nigrum | 687 | 11 Details |
|
| KC540796.1 | Solanum nigrum | 703 | 10 Details |
|
| KC540785.1 | Solanum nigrum | 693 | 11 Details |
|
| MH844597.1 | Solanum nigrum | 679 | 11 Details |
|
| AY863063.1 | Solanum nigrum | 621 | 9 Details |
|
| FJ980391.1 | Solanum nigrum | 683 | 11 Details |
|
| MW018361.1 | Solanum nigrum | 703 | 10 Details |
|
| AY863060.1 | Solanum nigrum | 621 | 9 Details |
|
| AJ300211.1 | Solanum nigrum | 636 | 7 Details |
|
| MN901225.1 | Solanum nigrum | 732 | 10 Details |
|
| KC540792.1 | Solanum nigrum | 690 | 11 Details |
RNA-Seq Information
| Experiment Acc. | Species Name | SRA Study | SRA Run | Treatment | Development Stage | Tissue | Data Accesss |
|---|---|---|---|---|---|---|---|
| SRX12488295 | Solanum nigrum | SRP340084 | SRR16203941 | leaf, shoot apice, and black fruit | |||
| SRX12488288 | Solanum nigrum | SRP340084 | SRR16203934 | leaf, shoot apice, and black fruit | |||
| SRX12488287 | Solanum nigrum | SRP340084 | SRR16203933 | leaf, shoot apice, and black fruit | |||
| SRX12488286 | Solanum nigrum | SRP340084 | SRR16203932 | leaf, shoot apice, and black fruit | |||
| SRX12488285 | Solanum nigrum | SRP340084 | SRR16203931 | leaf, shoot apice, and black fruit | |||
| SRX12488264 | Solanum nigrum | SRP340084 | SRR16203910 | leaf, shoot apice, and black fruit | |||
| SRX12488262 | Solanum nigrum | SRP340084 | SRR16203908 | leaf, shoot apice, and black fruit | |||
| SRX12488256 | Solanum nigrum | SRP340084 | SRR16203902 | leaf, shoot apice, and black fruit | |||
| SRX12488255 | Solanum nigrum | SRP340084 | SRR16203901 | leaf, shoot apice, and black fruit | |||
| ERX5335203 | Solanum nigrum | ERP127839 | ERR5555161 | ||||
| SRX9654460 | Solanum nigrum | SRP297216 | SRR13222019 | ||||
| SRX5270884 | Solanum nigrum | SRP180413 | SRR8464301 | ||||
| SRX5270883 | Solanum nigrum | SRP180413 | SRR8464302 | ||||
| SRX5270882 | Solanum nigrum | SRP180413 | SRR8464303 | ||||
| SRX5270881 | Solanum nigrum | SRP180413 | SRR8464304 | ||||
| SRX5270880 | Solanum nigrum | SRP180413 | SRR8464305 | ||||
| SRX5270879 | Solanum nigrum | SRP180413 | SRR8464306 | ||||
| ERX591479 | Solanum nigrum | ERP007073 | ERR634925 | ||||
| SRX1177420 | Solanum nigrum | SRP056695 | SRR2229595 | ||||
| SRX1177418 | Solanum nigrum | SRP056695 | SRR2229594 | ||||
| SRX1177415 | Solanum nigrum | SRP056695 | SRR2229597 | ||||
| ERX625145 | Solanum nigrum | ERP002644 | ERR670167 | ||||
| ERX625144 | Solanum nigrum | ERP002644 | ERR670166 | ||||
| SRX973321 | Solanum nigrum | SRP056695 | SRR2229598 | ||||
| SRX153761 | Solanum nigrum | SRP013704 | SRR512944 | ||||
| SRX153755 | Solanum nigrum | SRP013704 | SRR512942 | roots | |||
| SRX153739 | Solanum nigrum | SRP013704 | SRR512941 | roots | |||
| SRX153738 | Solanum nigrum | SRP013704 | SRR512939 | roots | |||
| SRX153737 | Solanum nigrum | SRP013704 | SRR512938 | roots | |||
| SRX153736 | Solanum nigrum | SRP013704 | SRR512937 | roots |
Other non-coding Sequence Information
* If data is not displayed please access the respective tab